Information for 3-CTGTTTVTGDGATTTT (Motif 5)

A T G C A G C T T A C G A C G T A C G T A C G T T A G C A C G T C T A G C G T A A T C G C G T A C G A T A C G T A C G T C G A T
Reverse Opposite:
C G T A C G T A G T C A C G T A A C G T A T G C G A C T A G T C T G C A A C T G C G T A G T C A C G T A A T G C C T G A A T C G
p-value:1e-9
log p-value:-2.286e+01
Information Content per bp:1.731
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif4.67%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.7 +/- 33.3bp
Average Position of motif in Background24.7 +/- 3.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CTGTTTVTGDGATTTT
------CNGTGATTTN
 A T G C A G C T T A C G A C G T A C G T A C G T T A G C A C G T C T A G C G T A A T C G C G T A C G A T A C G T A C G T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:2
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTGTTTVTGDGATTTT
---TTTCTNAGAAAN-
 A T G C A G C T T A C G A C G T A C G T A C G T T A G C A C G T C T A G C G T A A T C G C G T A C G A T A C G T A C G T C G A T
A C G T A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CTGTTTVTGDGATTTT
----TGCTGTGATTT-
 A T G C A G C T T A C G A C G T A C G T A C G T T A G C A C G T C T A G C G T A A T C G C G T A C G A T A C G T A C G T C G A T
A C G T A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTGTTTVTGDGATTTT
NAATTTTACGAGNTNN-
 A C G T A T G C A G C T T A C G A C G T A C G T A C G T T A G C A C G T C T A G C G T A A T C G C G T A C G A T A C G T A C G T C G A T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTGTTTVTGDGATTTT-
-TCTTTCGAGGAATTTG
 A T G C A G C T T A C G A C G T A C G T A C G T T A G C A C G T C T A G C G T A A T C G C G T A C G A T A C G T A C G T C G A T A C G T
A C G T C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

PB0098.1_Zfp410_1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CTGTTTVTGDGATTTT---
--TATTATGGGATGGATAA
 A T G C A G C T T A C G A C G T A C G T A C G T T A G C A C G T C T A G C G T A A T C G C G T A C G A T A C G T A C G T C G A T A C G T A C G T A C G T
A C G T A C G T C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

PH0048.1_Hoxa13/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CTGTTTVTGDGATTTT
ANATTTTACGAGNNNN-
 A C G T A T G C A G C T T A C G A C G T A C G T A C G T T A G C A C G T C T A G C G T A A T C G C G T A C G A T A C G T A C G T C G A T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CTGTTTVTGDGATTTT
-TGTTTATTT------
 A T G C A G C T T A C G A C G T A C G T A C G T T A G C A C G T C T A G C G T A A T C G C G T A C G A T A C G T A C G T C G A T
A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CTGTTTVTGDGATTTT
---TTTCCAGGAAA--
 A T G C A G C T T A C G A C G T A C G T A C G T T A G C A C G T C T A G C G T A A T C G C G T A C G A T A C G T A C G T C G A T
A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CTGTTTVTGDGATTTT
-TGTTTAC--------
 A T G C A G C T T A C G A C G T A C G T A C G T T A G C A C G T C T A G C G T A A T C G C G T A C G A T A C G T A C G T C G A T
A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T