p-value: | 1e-12 |
log p-value: | -2.829e+01 |
Information Content per bp: | 1.890 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 5.61% |
Number of Background Sequences with motif | 1.1 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 40.8 +/- 20.2bp |
Average Position of motif in Background | 71.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGCCATAGC TTGCCAAG-- |
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NFIC/MA0161.1/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTGCCATAGC -TGCCAA--- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 3 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CTGCCATAGC CGTGCCAAG-- |
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Myb/MA0100.2/Jaspar
Match Rank: | 4 |
Score: | 0.65 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CTGCCATAGC CCAACTGCCA---- |
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YY2/MA0748.1/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTGCCATAGC GTCCGCCATTA- |
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NFIA/MA0670.1/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CTGCCATAGC GGTGCCAAGT- |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTGCCATAGC GCTGTCAA--- |
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Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
Match Rank: | 8 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTGCCATAGC -TGTCANYT- |
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Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGCCATAGC YTGWCADY-- |
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MEIS3/MA0775.1/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTGCCATAGC CCTGTCAA--- |
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