Information for 11-CTAGATGGCG (Motif 16)

A T G C G A C T C T G A C T A G C G T A A G C T A C T G A C T G T A G C C T A G
Reverse Opposite:
G A T C A T C G A G T C A G T C C T G A A C G T A G T C A G C T C G T A A T C G
p-value:1e-4
log p-value:-9.951e+00
Information Content per bp:1.771
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif4.67%
Number of Background Sequences with motif14.9
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets51.9 +/- 31.2bp
Average Position of motif in Background48.0 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CTAGATGGCG--
CAAGATGGCGGC
 A T G C G A C T C T G A C T A G C G T A A G C T A C T G A C T G T A G C C T A G A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CTAGATGGCG--
CAAGATGGCGGC
 A T G C G A C T C T G A C T A G C G T A A G C T A C T G A C T G T A G C C T A G A C G T A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CTAGATGGCG
AACAGATGGC-
 A C G T A T G C G A C T C T G A C T A G C G T A A G C T A C T G A C T G T A G C C T A G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CTAGATGGCG---
--TAATGGCGGNC
 A T G C G A C T C T G A C T A G C G T A A G C T A C T G A C T G T A G C C T A G A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CTAGATGGCG---
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T A T G C G A C T C T G A C T A G C G T A A G C T A C T G A C T G T A G C C T A G A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTAGATGGCG
AACAGATGGT-
 A C G T A T G C G A C T C T G A C T A G C G T A A G C T A C T G A C T G T A G C C T A G
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTAGATGGCG
GTTAATGGCC
 A T G C G A C T C T G A C T A G C G T A A G C T A C T G A C T G T A G C C T A G
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------CTAGATGGCG----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T C T G A C T A G C G T A A G C T A C T G A C T G T A G C C T A G A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTAGATGGCG
AACAKATGGY-
 A C G T A T G C G A C T C T G A C T A G C G T A A G C T A C T G A C T G T A G C C T A G
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTAGATGGCG
VNAVCAGCTGGC-
 A C G T A C G T A C G T A T G C G A C T C T G A C T A G C G T A A G C T A C T G A C T G T A G C C T A G
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T