Information for 8-TGTCACYAAT (Motif 12)

A C G T A C T G A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G A T
Reverse Opposite:
C G T A A C G T A C G T C T A G C T A G A C G T A C T G C G T A A G T C C G T A
p-value:1e-6
log p-value:-1.401e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif4.67%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets43.6 +/- 28.6bp
Average Position of motif in Background41.9 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TGTCACYAAT
NTGTCAN----
 A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G A T
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TGTCACYAAT
CCTGTCAA----
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G A T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TGTCACYAAT
VGCTGWCAVB---
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G A T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGTCACYAAT
SCTGTCARCACC
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G A T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGTCACYAAT
YTGWCADY---
 A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G A T
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGTCACYAAT
TGTCANYT--
 A C G T A C T G A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G A T
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGTCACYAAT
GCTGTCAA----
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G A T
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGTCACYAAT---
GGAGGTCATTAATTAT
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G A T A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGTCACYAAT
GSCTGTCACTCA-
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G A T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGTCACYAAT
NCTGTCAATCAN
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G A T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A