Information for 4-CCTGGMKGGKKMT (Motif 7)

A G T C A G T C A C G T A C T G A C T G G T C A A C G T A C T G A C T G A C G T A C T G G T A C A C G T
Reverse Opposite:
C G T A A C T G G T A C T G A C A G T C A G T C G T C A A C G T A G T C A G T C C G T A A C T G A C T G
p-value:1e-6
log p-value:-1.508e+01
Information Content per bp:1.850
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif6.12%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.4 +/- 21.0bp
Average Position of motif in Background54.6 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTGGMKGGKKMT
CGTGGGTGGTCC-
 A G T C A G T C A C G T A C T G A C T G G T C A A C G T A C T G A C T G A C G T A C T G G T A C A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCTGGMKGGKKMT--
GTATTGGGTGGGTAATT
 A C G T A C G T A G T C A G T C A C G T A C T G A C T G G T C A A C G T A C T G A C T G A C G T A C T G G T A C A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGGMKGGKKMT
RYHYACCTGB--------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G G T C A A C G T A C T G A C T G A C G T A C T G G T A C A C G T
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGMKGGKKMT-
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G G T C A A C G T A C T G A C T G A C G T A C T G G T A C A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCTGGMKGGKKMT
---GGGGGGGG--
 A G T C A G T C A C G T A C T G A C T G G T C A A C G T A C T G A C T G A C G T A C T G G T A C A C G T
A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCTGGMKGGKKMT
-GTGGGGGGGG--
 A G T C A G T C A C G T A C T G A C T G G T C A A C G T A C T G A C T G A C G T A C T G G T A C A C G T
A C G T C T A G C A G T C A T G A C T G T C A G C T A G C T A G C A T G C A T G A C T G A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CCTGGMKGGKKMT
CCCCCCCGGGGGGGT---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G G T C A A C G T A C T G A C T G A C G T A C T G G T A C A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCTGGMKGGKKMT-
CTTCGCGGGGGGTC
 A G T C A G T C A C G T A C T G A C T G G T C A A C G T A C T G A C T G A C G T A C T G G T A C A C G T A C G T
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCTGGMKGGKKMT
CACCCCCGGGGGGG---
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G G T C A A C G T A C T G A C T G A C G T A C T G G T A C A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCTGGMKGGKKMT
NNCACCTGNN-------
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G G T C A A C G T A C T G A C T G A C G T A C T G G T A C A C G T
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T