p-value: | 1e-4 |
log p-value: | -1.132e+01 |
Information Content per bp: | 1.762 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 8.16% |
Number of Background Sequences with motif | 136.5 |
Percentage of Background Sequences with motif | 0.28% |
Average Position of motif in Targets | 30.2 +/- 19.9bp |
Average Position of motif in Background | 47.6 +/- 36.1bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGCMGGCAGGCAG AGGTGNCAGACAG |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGCMGGCAGGCAG AGGTGHCAGACA- |
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Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGCMGGCAGGCAG TGGCAGNCTGCCAG |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GGCMGGCAGGCAG -----CCAGACAG |
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ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GGCMGGCAGGCAG-- -----ACAGGAAGTG |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GGCMGGCAGGCAG-- -----CCAGACRSVB |
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Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GGCMGGCAGGCAG- ----AACAGGAAGT |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GGCMGGCAGGCAG ----CACAGN--- |
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ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GGCMGGCAGGCAG-- -----ACAGGAAGTG |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGCMGGCAGGCAG--- -SCAGYCADGCATGAC |
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