Information for 4-CGGCAGCGGCTGGGGC (Motif 5)

A G T C A C T G A T C G A T G C C G T A C T A G A T G C A T C G A T C G A T G C A G C T A C T G A T C G A C T G A C T G A T G C
Reverse Opposite:
A T C G A G T C G T A C A T G C A G T C C T G A A T C G A T G C A T G C A T C G A G T C A C G T A T C G A T G C A G T C A C T G
p-value:1e-8
log p-value:-2.041e+01
Information Content per bp:1.827
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.78%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets66.2 +/- 14.2bp
Average Position of motif in Background43.2 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGGCAGCGGCTGGGGC
-GGGNGGGGGCGGGGC
 A G T C A C T G A T C G A T G C C G T A C T A G A T G C A T C G A T C G A T G C A G C T A C T G A T C G A C T G A C T G A T G C
A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

SP1/MA0079.3/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CGGCAGCGGCTGGGGC
-----GGGGGCGGGGC
 A G T C A C T G A T C G A T G C C G T A C T A G A T G C A T C G A T C G A T G C A G C T A C T G A T C G A C T G A C T G A T G C
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

KLF5/MA0599.1/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CGGCAGCGGCTGGGGC
------GGGGNGGGGC
 A G T C A C T G A T C G A T G C C G T A C T A G A T G C A T C G A T C G A T G C A G C T A C T G A T C G A C T G A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CGGCAGCGGCTGGGGC-
-----GGGGGCGGGGCC
 A G T C A C T G A T C G A T G C C G T A C T A G A T G C A T C G A T C G A T G C A G C T A C T G A T C G A C T G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CGGCAGCGGCTGGGGC
-------GGGGGGGG-
 A G T C A C T G A T C G A T G C C G T A C T A G A T G C A T C G A T C G A T G C A G C T A C T G A T C G A C T G A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CGGCAGCGGCTGGGGC--
---NNVDGGGYGGGGCYN
 A G T C A C T G A T C G A T G C C G T A C T A G A T G C A T C G A T C G A T G C A G C T A C T G A T C G A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CGGCAGCGGCTGGGGC
------TGGGTGGGGC
 A G T C A C T G A T C G A T G C C G T A C T A G A T G C A T C G A T C G A T G C A G C T A C T G A T C G A C T G A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGGCAGCGGCTGGGGC--
----AGGGGGCGGGGCTG
 A G T C A C T G A T C G A T G C C G T A C T A G A T G C A T C G A T C G A T G C A G C T A C T G A T C G A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CGGCAGCGGCTGGGGC
----RGKGGGCGKGGC
 A G T C A C T G A T C G A T G C C G T A C T A G A T G C A T C G A T C G A T G C A G C T A C T G A T C G A C T G A C T G A T G C
A C G T A C G T A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CGGCAGCGGCTGGGGC
----RGTGGGYGTGGC
 A G T C A C T G A T C G A T G C C G T A C T A G A T G C A T C G A T C G A T G C A G C T A C T G A T C G A C T G A C T G A T G C
A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C