Information for 2-AGGCAGCCATCAGCCG (Motif 4)

C T G A T A C G A C T G A G T C G C T A A C T G A T G C A G T C G C T A A C G T A G T C G C T A A C T G A G T C G T A C A T C G
Reverse Opposite:
A T G C C A T G A C T G A G T C C G A T A C T G G T C A C G A T A C T G A T C G A G T C C G A T C T A G T G A C A T G C A G C T
p-value:1e-13
log p-value:-3.034e+01
Information Content per bp:1.738
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.63%
Number of Background Sequences with motif14.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.1 +/- 15.2bp
Average Position of motif in Background48.8 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.63
Offset:5
Orientation:forward strand
Alignment:AGGCAGCCATCAGCCG
-----GCCATCTGTT-
 C T G A T A C G A C T G A G T C G C T A A C T G A T G C A G T C G C T A A C G T A G T C G C T A A C T G A G T C G T A C A T C G
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGCAGCCATCAGCCG--
-CCNNACCATCTGGCCTN
 C T G A T A C G A C T G A G T C G C T A A C T G A T G C A G T C G C T A A C G T A G T C G C T A A C T G A G T C G T A C A T C G A C G T A C G T
A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AGGCAGCCATCAGCCG
-----ACCATCTGTT-
 C T G A T A C G A C T G A G T C G C T A A C T G A T G C A G T C G C T A A C G T A G T C G C T A A C T G A G T C G T A C A T C G
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGGCAGCCATCAGCCG-
---NTGCCCTTGGGCGN
 C T G A T A C G A C T G A G T C G C T A A C T G A T G C A G T C G C T A A C G T A G T C G C T A A C T G A G T C G T A C A T C G A C G T
A C G T A C G T A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGGCAGCCATCAGCCG-
-----GCCAGCTGBTNB
 C T G A T A C G A C T G A G T C G C T A A C T G A T G C A G T C G C T A A C G T A G T C G C T A A C T G A G T C G T A C A T C G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGGCAGCCATCAGCCG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T C T G A T A C G A C T G A G T C G C T A A C T G A T G C A G T C G C T A A C G T A G T C G C T A A C T G A G T C G T A C A T C G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGGCAGCCATCAGCCG
-GTCCGCCATTA----
 C T G A T A C G A C T G A G T C G C T A A C T G A T G C A G T C G C T A A C G T A G T C G C T A A C T G A G T C G T A C A T C G
A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGGCAGCCATCAGCCG
---CTGCCCGCA----
 C T G A T A C G A C T G A G T C G C T A A C T G A T G C A G T C G C T A A C G T A G T C G C T A A C T G A G T C G T A C A T C G
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGGCAGCCATCAGCCG--
---CGACCAACTGCCGTG
 C T G A T A C G A C T G A G T C G C T A A C T G A T G C A G T C G C T A A C G T A G T C G C T A A C T G A G T C G T A C A T C G A C G T A C G T
A C G T A C G T A C G T A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:AGGCAGCCATCAGCCG
-------CAGCTGNT-
 C T G A T A C G A C T G A G T C G C T A A C T G A T G C A G T C G C T A A C G T A G T C G C T A A C T G A G T C G T A C A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T