Information for 5-AACTATTCAG (Motif 15)

C G T A C G T A A T G C G A C T C G T A A C G T C G A T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A T G C A C G A T C T G A A T C G A C G T A C G T
p-value:1e-7
log p-value:-1.721e+01
Information Content per bp:1.867
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif49.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets58.1 +/- 24.5bp
Average Position of motif in Background51.8 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AACTATTCAG
AATTATT---
 C G T A C G T A A T G C G A C T C G T A A C G T C G A T A G T C C G T A A C T G
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AACTATTCAG
CATTAATTATTCAT
 A C G T A C G T A C G T A C G T C G T A C G T A A T G C G A C T C G T A A C G T C G A T A G T C C G T A A C T G
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

NFYA/MA0060.2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AACTATTCAG------
TGGACCAATCAGCACTCT
 A C G T A C G T C G T A C G T A A T G C G A C T C G T A A C G T C G A T A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

DUXA/MA0884.1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AACTATTCAG
CTAATTTAATCAA
 A C G T A C G T A C G T C G T A C G T A A T G C G A C T C G T A A C G T C G A T A G T C C G T A A C T G
G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A

NFYB/MA0502.1/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AACTATTCAG
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T G C G A C T C G T A A C G T C G A T A G T C C G T A A C T G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

PB0066.1_Sox17_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AACTATTCAG--
ATAAACAATTAAACA
 A C G T A C G T A C G T C G T A C G T A A T G C G A C T C G T A A C G T C G A T A G T C C G T A A C T G A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------AACTATTCAG-
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T G C G A C T C G T A A C G T C G A T A G T C C G T A A C T G A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AACTATTCAG
GTTAACTAGN---
 A C G T A C G T A C G T C G T A C G T A A T G C G A C T C G T A A C G T C G A T A G T C C G T A A C T G
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AACTATTCAG
GAATATTCAT
 C G T A C G T A A T G C G A C T C G T A A C G T C G A T A G T C C G T A A C T G
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

POU4F3/MA0791.1/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AACTATTCAG
CTCATTAATTATGCAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T G C G A C T C G T A A C G T C G A T A G T C C G T A A C T G
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T