Information for 8-CGCCTGCGCTTTG (Motif 10)

A G T C A T C G A G T C A T G C A C G T A C T G G T A C T A C G A G T C A C G T G A C T A G C T A T C G
Reverse Opposite:
A T G C C T G A C T G A T G C A C T A G A G T C A C T G A G T C C G T A A T C G C T A G A T G C T C A G
p-value:1e-9
log p-value:-2.108e+01
Information Content per bp:1.711
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.96%
Number of Background Sequences with motif68.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets50.2 +/- 27.8bp
Average Position of motif in Background41.4 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CGCCTGCGCTTTG
GCGCCTGCGCA---
 A C G T A G T C A T C G A G T C A T G C A C G T A C T G G T A C T A C G A G T C A C G T G A C T A G C T A T C G
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CGCCTGCGCTTTG
---CTGACCTTTG
 A G T C A T C G A G T C A T G C A C G T A C T G G T A C T A C G A G T C A C G T G A C T A G C T A T C G
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CGCCTGCGCTTTG
CTGCGCATGCGC----
 A C G T A C G T A C G T A G T C A T C G A G T C A T G C A C G T A C T G G T A C T A C G A G T C A C G T G A C T A G C T A T C G
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGCCTGCGCTTTG
GTGCGCATGCGC----
 A C G T A C G T A C G T A G T C A T C G A G T C A T G C A C G T A C T G G T A C T A C G A G T C A C G T G A C T A G C T A T C G
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CGCCTGCGCTTTG------
----TGGACTTTGNNCTCN
 A G T C A T C G A G T C A T G C A C G T A C T G G T A C T A C G A G T C A C G T G A C T A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CGCCTGCGCTTTG-------
----TGGACTTTGNNCTNTG
 A G T C A T C G A G T C A T G C A C G T A C T G G T A C T A C G A G T C A C G T G A C T A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGCCTGCGCTTTG---
NNNGTGACCTTTGNNN
 A G T C A T C G A G T C A T G C A C G T A C T G G T A C T A C G A G T C A C G T G A C T A G C T A T C G A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGCCTGCGCTTTG--
TGCCTGCGYCMCCTT
 A G T C A T C G A G T C A T G C A C G T A C T G G T A C T A C G A G T C A C G T G A C T A G C T A T C G A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGCCTGCGCTTTG---
NNNNTGACCTTTNNNN
 A G T C A T C G A G T C A T G C A C G T A C T G G T A C T A C G A G T C A C G T G A C T A G C T A T C G A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGCCTGCGCTTTG
---TTGCGGTTT-
 A G T C A T C G A G T C A T G C A C G T A C T G G T A C T A C G A G T C A C G T G A C T A G C T A T C G
A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T