Information for 5-CAAGATGGCTGCC (Motif 7)

A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A T G C G T A C
Reverse Opposite:
A C T G A T C G A G T C C G T A A T C G A G T C A G T C C G T A A C G T A G T C A C G T C G A T C T A G
p-value:1e-11
log p-value:-2.658e+01
Information Content per bp:1.882
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.7 +/- 23.6bp
Average Position of motif in Background47.9 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:CAAGATGGCTGCC
CAAGATGGCGGC-
 A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A T G C G T A C
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.83
Offset:0
Orientation:forward strand
Alignment:CAAGATGGCTGCC
CAAGATGGCGGC-
 A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A T G C G T A C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAAGATGGCTGCC
AACAGATGGC----
 A C G T A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A T G C G T A C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CAAGATGGCTGCC
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A T G C G T A C
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAAGATGGCTGCC
-ATGATKGATGRC
 A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A T G C G T A C
A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

YY2/MA0748.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAAGATGGCTGCC
--TAATGGCGGNC
 A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A T G C G T A C
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAAGATGGCTGCC
AACAGATGGT----
 A C G T A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A T G C G T A C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CAAGATGGCTGCC
----TWGTCTGV-
 A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A T G C G T A C
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

PROX1/MA0794.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAAGATGGCTGCC
CAAGACGCCTTA-
 A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A T G C G T A C
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CAAGATGGCTGCC
VNAVCAGCTGGC----
 A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A T G C G T A C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T