Information for 3-GAGGTGCTCNGGV (Motif 4)

A T C G G T C A A T C G T A C G A C G T A C T G A T G C A C G T T A G C A T G C A C T G A T C G T A G C
Reverse Opposite:
A T C G A T G C T G A C T A C G A T C G T G C A T A C G T G A C T G C A A T G C A T G C C A G T T A G C
p-value:1e-13
log p-value:-3.175e+01
Information Content per bp:1.581
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.9 +/- 24.9bp
Average Position of motif in Background45.8 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF3/MA0522.2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTGCTCNGGV
NNCAGGTGTN-----
 A C G T A C G T A T C G G T C A A T C G T A C G A C G T A C T G A T G C A C G T T A G C A T G C A C T G A T C G T A G C
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GAGGTGCTCNGGV
SDGCAGGTGCNS----
 A C G T A C G T A C G T A T C G G T C A A T C G T A C G A C G T A C T G A T G C A C G T T A G C A T G C A C T G A T C G T A G C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTGCTCNGGV
NNCAGGTGCG-----
 A C G T A C G T A T C G G T C A A T C G T A C G A C G T A C T G A T G C A C G T T A G C A T G C A C T G A T C G T A G C
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTGCTCNGGV
GACAGGTGTN-----
 A C G T A C G T A T C G G T C A A T C G T A C G A C G T A C T G A T G C A C G T T A G C A T G C A C T G A T C G T A G C
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTGCTCNGGV
NNCAGGTGNN-----
 A C G T A C G T A T C G G T C A A T C G T A C G A C G T A C T G A T G C A C G T T A G C A T G C A C T G A T C G T A G C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTGCTCNGGV
AACAGGTGNT-----
 A C G T A C G T A T C G G T C A A T C G T A C G A C G T A C T G A T G C A C G T T A G C A T G C A C T G A T C G T A G C
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAGGTGCTCNGGV
AACAGGTGT------
 A C G T A C G T A T C G G T C A A T C G T A C G A C G T A C T G A T G C A C G T T A G C A T G C A C T G A T C G T A G C
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAGGTGCTCNGGV
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A T C G G T C A A T C G T A C G A C G T A C T G A T G C A C G T T A G C A T G C A C T G A T C G T A G C
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GAGGTGCTCNGGV
CTCAGCAGCTGCTACTG-
 A C G T A C G T A C G T A C G T A C G T A T C G G T C A A T C G T A C G A C G T A C T G A T G C A C G T T A G C A T G C A C T G A T C G T A G C
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GAGGTGCTCNGGV
ATCCACAGGTGCGAAAA-
 A C G T A C G T A C G T A C G T A C G T A T C G G T C A A T C G T A C G A C G T A C T G A T G C A C G T T A G C A T G C A C T G A T C G T A G C
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A A C G T