Information for 3-RGGCGGRCCC (Motif 3)

C T A G A C T G C T A G T G A C A C T G C A T G C T G A T A G C G A T C A T G C
Reverse Opposite:
A T C G C T A G A T C G G A C T G T A C A G T C A C T G A G T C A G T C G A T C
p-value:1e-14
log p-value:-3.378e+01
Information Content per bp:1.721
Number of Target Sequences with motif91.0
Percentage of Target Sequences with motif10.45%
Number of Background Sequences with motif2006.9
Percentage of Background Sequences with motif4.14%
Average Position of motif in Targets55.6 +/- 28.3bp
Average Position of motif in Background48.0 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--RGGCGGRCCC
GGGGGCGGGGCC
 A C G T A C G T C T A G A C T G C T A G T G A C A C T G C A T G C T G A T A G C G A T C A T G C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---RGGCGGRCCC-
AGGGGGCGGGGCTG
 A C G T A C G T A C G T C T A G A C T G C T A G T G A C A C T G C A T G C T G A T A G C G A T C A T G C A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---RGGCGGRCCC
RGKGGGCGGAGC-
 A C G T A C G T A C G T C T A G A C T G C T A G T G A C A C T G C A T G C T G A T A G C G A T C A T G C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.81
Offset:-6
Orientation:reverse strand
Alignment:------RGGCGGRCCC
GGGNGGGGGCGGGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T A G T G A C A C T G C A T G C T G A T A G C G A T C A T G C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--RGGCGGRCCC
GGGGGCGGGGC-
 A C G T A C G T C T A G A C T G C T A G T G A C A C T G C A T G C T G A T A G C G A T C A T G C
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---RGGCGGRCCC--
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T C T A G A C T G C T A G T G A C A C T G C A T G C T G A T A G C G A T C A T G C A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-RGGCGGRCCC
GGGGNGGGGC-
 A C G T C T A G A C T G C T A G T G A C A C T G C A T G C T G A T A G C G A T C A T G C
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---RGGCGGRCCC
RGKGGGCGKGGC-
 A C G T A C G T A C G T C T A G A C T G C T A G T G A C A C T G C A T G C T G A T A G C G A T C A T G C
C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-RGGCGGRCCC
DGGGYGKGGC-
 A C G T C T A G A C T G C T A G T G A C A C T G C A T G C T G A T A G C G A T C A T G C
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----RGGCGGRCCC-
NNVDGGGYGGGGCYN
 A C G T A C G T A C G T A C G T C T A G A C T G C T A G T G A C A C T G C A T G C T G A T A G C G A T C A T G C A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A