Information for 15-CTTGGCACCAGGC (Motif 22)

A G T C A C G T A C G T A C T G A C T G A G T C G C T A A T G C G T A C C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C T G A T C G C A G T A C T G A G T C A G T C C G T A C G T A A C T G
p-value:1e-8
log p-value:-1.944e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 14.2bp
Average Position of motif in Background71.5 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTTGGCACCAGGC
NNTTGGCANN----
 A C G T A G T C A C G T A C G T A C T G A C T G A G T C G C T A A T G C G T A C C G T A A C T G A C T G A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTTGGCACCAGGC
NTTGGCANN----
 A G T C A C G T A C G T A C T G A C T G A G T C G C T A A T G C G T A C C G T A A C T G A C T G A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTTGGCACCAGGC---
--TGGCACCATGCCAA
 A G T C A C G T A C G T A C T G A C T G A G T C G C T A A T G C G T A C C G T A A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTTGGCACCAGGC
-TTGGCA------
 A G T C A C G T A C G T A C T G A C T G A G T C G C T A A T G C G T A C C G T A A C T G A C T G A G T C
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTTGGCACCAGGC---
CTTGGCANNNTGCCAA
 A G T C A C G T A C G T A C T G A C T G A G T C G C T A A T G C G T A C C G T A A C T G A C T G A G T C A C G T A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTTGGCACCAGGC
CTTGGCAA-----
 A G T C A C G T A C G T A C T G A C T G A G T C G C T A A T G C G T A C C G T A A C T G A C T G A G T C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTTGGCACCAGGC---
-NTNGCCTCAGGCNNN
 A G T C A C G T A C G T A C T G A C T G A G T C G C T A A T G C G T A C C G T A A C T G A C T G A G T C A C G T A C G T A C G T
A C G T G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTTGGCACCAGGC
-WTGSCCTSAGGS
 A G T C A C G T A C G T A C T G A C T G A G T C G C T A A T G C G T A C C G T A A C T G A C T G A G T C
A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTTGGCACCAGGC-
---AGCCTCAGGCA
 A G T C A C G T A C G T A C T G A C T G A G T C G C T A A T G C G T A C C G T A A C T G A C T G A G T C A C G T
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTTGGCACCAGGC-
---CGCCTCAGGCA
 A G T C A C G T A C G T A C T G A C T G A G T C G C T A A T G C G T A C C G T A A C T G A C T G A G T C A C G T
A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A