Information for 13-TTCCCTCTCTCCC (Motif 20)

C A G T A G C T A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G C T A G A C T G C G T A A C T G C G T A C T A G C G T A A C T G A C T G C T A G C T G A G C T A
p-value:1e-8
log p-value:-2.038e+01
Information Content per bp:1.892
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif17.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets39.9 +/- 22.2bp
Average Position of motif in Background42.1 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTCCCTCTCTCCC--
TGACCTTTGCCCTAN
 C A G T A G C T A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTCCCTCTCTCCC--
---CCCCTCCCCCAC
 C A G T A G C T A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTCCCTCTCTCCC-
TGACCTTTGCCCCA
 C A G T A G C T A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTCCCTCTCTCCC
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T C A G T A G C T A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTCCCTCTCTCCC
NCTTCCCGCCC----
 A C G T A C G T C A G T A G C T A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCCCTCTCTCCC-
TGACCTTTGCCCTA
 C A G T A G C T A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTCCCTCTCTCCC
NNGCACCTTTCTCC-
 A C G T A C G T C A G T A G C T A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTCCCTCTCTCCC--
TGACCTCTGACCCCN
 C A G T A G C T A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTCCCTCTCTCCC---
-TCCCCCCCCCCCCCC
 C A G T A G C T A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T C A G T A G T C G T A C G T A C T A G C G T A C G A T C G A T C G T A C G A T C G T A C G T A C G T A C G A T C T G A C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTCCCTCTCTCCC
NYTTCCCGCC-----
 A C G T A C G T C A G T A G C T A G T C A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T