Information for 4-RCWAGSWKKSWGA (Motif 5)

C T G A A T G C C G A T G T C A A C T G T A C G C G A T A C T G A C T G A T G C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C C G A T A T C G G T A C G T A C C G T A A T C G A G T C A C G T C G T A A T C G A G C T
p-value:1e-9
log p-value:-2.098e+01
Information Content per bp:1.767
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif7.37%
Number of Background Sequences with motif91.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets45.1 +/- 25.1bp
Average Position of motif in Background49.4 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:RCWAGSWKKSWGA---
---AGGTGNCAGACAG
 C T G A A T G C C G A T G T C A A C T G T A C G C G A T A C T G A C T G A T G C C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:RCWAGSWKKSWGA--
---AGGTGHCAGACA
 C T G A A T G C C G A T G T C A A C T G T A C G C G A T A C T G A C T G A T G C C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:RCWAGSWKKSWGA
-CAAGCTT-----
 C T G A A T G C C G A T G T C A A C T G T A C G C G A T A C T G A C T G A T G C C G T A A C T G C G T A
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--RCWAGSWKKSWGA-
CTACTAGGATGTNNTN
 A C G T A C G T C T G A A T G C C G A T G T C A A C T G T A C G C G A T A C T G A C T G A T G C C G T A A C T G C G T A A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:forward strand
Alignment:RCWAGSWKKSWGA
---AGGTGTCA--
 C T G A A T G C C G A T G T C A A C T G T A C G C G A T A C T G A C T G A T G C C G T A A C T G C G T A
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:RCWAGSWKKSWGA
---AGGTGTGA--
 C T G A A T G C C G A T G T C A A C T G T A C G C G A T A C T G A C T G A T G C C G T A A C T G C G T A
A C G T A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.49
Offset:3
Orientation:forward strand
Alignment:RCWAGSWKKSWGA
---AGGTGTGA--
 C T G A A T G C C G A T G T C A A C T G T A C G C G A T A C T G A C T G A T G C C G T A A C T G C G T A
A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:8
Score:0.48
Offset:3
Orientation:forward strand
Alignment:RCWAGSWKKSWGA
---AGGTGTGA--
 C T G A A T G C C G A T G T C A A C T G T A C G C G A T A C T G A C T G A T G C C G T A A C T G C G T A
A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.48
Offset:2
Orientation:forward strand
Alignment:RCWAGSWKKSWGA
--AAGGTGTGAAA
 C T G A A T G C C G A T G T C A A C T G T A C G C G A T A C T G A C T G A T G C C G T A A C T G C G T A
A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.48
Offset:3
Orientation:forward strand
Alignment:RCWAGSWKKSWGA
---AGGTGTGA--
 C T G A A T G C C G A T G T C A A C T G T A C G C G A T A C T G A C T G A T G C C G T A A C T G C G T A
A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T