Information for 3-SACCMCATCKCAYGCC (Motif 3)

A T C G T C G A A G T C A G T C G T A C A G T C C G T A A C G T A G T C A C G T A G T C G T C A A G C T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C T A G A C G T A C T G G T A C A C T G T C G A A C G T A C T G A C G T A C T G A C T G A C G T A T C G
p-value:1e-14
log p-value:-3.262e+01
Information Content per bp:1.821
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.8 +/- 27.1bp
Average Position of motif in Background56.9 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--SACCMCATCKCAYGCC
NWAACCACADNN------
 A C G T A C G T A T C G T C G A A G T C A G T C G T A C A G T C C G T A A C G T A G T C A C G T A G T C G T C A A G C T A C T G A G T C A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-SACCMCATCKCAYGCC
AAACCACAGC-------
 A C G T A T C G T C G A A G T C A G T C G T A C A G T C C G T A A C G T A G T C A C G T A G T C G T C A A G C T A C T G A G T C A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.53
Offset:8
Orientation:forward strand
Alignment:SACCMCATCKCAYGCC
--------AGCGCGCC
 A T C G T C G A A G T C A G T C G T A C A G T C C G T A A C G T A G T C A C G T A G T C G T C A A G C T A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

EGR1/MA0162.2/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:SACCMCATCKCAYGCC
--CCCCCGCCCCCGCC
 A T C G T C G A A G T C A G T C G T A C A G T C C G T A A C G T A G T C A C G T A G T C G T C A A G C T A C T G A G T C A G T C
A C G T A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.52
Offset:7
Orientation:forward strand
Alignment:SACCMCATCKCAYGCC-
-------TBGCACGCAA
 A T C G T C G A A G T C A G T C G T A C A G T C C G T A A C G T A G T C A C G T A G T C G T C A A G C T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--SACCMCATCKCAYGCC
NAAACCACAG--------
 A C G T A C G T A T C G T C G A A G T C A G T C G T A C A G T C C G T A A C G T A G T C A C G T A G T C G T C A A G C T A C T G A G T C A G T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-SACCMCATCKCAYGCC
AAACCACAGAN------
 A C G T A T C G T C G A A G T C A G T C G T A C A G T C C G T A A C G T A G T C A C G T A G T C G T C A A G C T A C T G A G T C A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:SACCMCATCKCAYGCC------
--CCCCAAACCACCCCCCCCCA
 A T C G T C G A A G T C A G T C G T A C A G T C C G T A A C G T A G T C A C G T A G T C G T C A A G C T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-SACCMCATCKCAYGCC
AAACCACANN-------
 A C G T A T C G T C G A A G T C A G T C G T A C A G T C C G T A A C G T A G T C A C G T A G T C G T C A A G C T A C T G A G T C A G T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:SACCMCATCKCAYGCC-
------NNTTCCCGCCC
 A T C G T C G A A G T C A G T C G T A C A G T C C G T A A C G T A G T C A C G T A G T C G T C A A G C T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C