Information for 6-TGACACCCCA (Motif 11)

A G C T C T A G C G T A A G T C C G T A A G T C A G T C A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C T A G A C T G A C G T A C T G A C G T A G T C C T G A
p-value:1e-6
log p-value:-1.426e+01
Information Content per bp:1.923
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.21%
Number of Background Sequences with motif33.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets49.6 +/- 26.6bp
Average Position of motif in Background47.1 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----TGACACCCCA--
ATAAATGACACCTATCA
 A C G T A C G T A C G T A C G T A C G T A G C T C T A G C G T A A G T C C G T A A G T C A G T C A G T C A G T C C G T A A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

PH0162.1_Six2/Jaspar

Match Rank:2
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----TGACACCCCA--
ANANGTGATACCCCATT
 A C G T A C G T A C G T A C G T A C G T A G C T C T A G C G T A A G T C C G T A A G T C A G T C A G T C A G T C C G T A A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

PH0165.1_Six6_1/Jaspar

Match Rank:3
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TGACACCCCA--
ANANNTGATACCCTATN
 A C G T A C G T A C G T A C G T A C G T A G C T C T A G C G T A A G T C C G T A A G T C A G T C A G T C A G T C C G T A A C G T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TGACACCCCA-
-ATCACCCCAT
 A G C T C T A G C G T A A G T C C G T A A G T C A G T C A G T C A G T C C G T A A C G T
A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:5
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TGACACCCCA-
-ATCACCCCAT
 A G C T C T A G C G T A A G T C C G T A A G T C A G T C A G T C A G T C C G T A A C G T
A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

PB0059.1_Six6_1/Jaspar

Match Rank:6
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TGACACCCCA--
ANANNTGATACCCNATN
 A C G T A C G T A C G T A C G T A C G T A G C T C T A G C G T A A G T C C G T A A G T C A G T C A G T C A G T C C G T A A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PB0025.1_Glis2_1/Jaspar

Match Rank:7
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TGACACCCCA---
TATCGACCCCCCACAG
 A C G T A C G T A C G T A G C T C T A G C G T A A G T C C G T A A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C G T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

PH0161.1_Six1/Jaspar

Match Rank:8
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TGACACCCCA--
ANNNATGATACCCCATC
 A C G T A C G T A C G T A C G T A C G T A G C T C T A G C G T A A G T C C G T A A G T C A G T C A G T C A G T C C G T A A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

SREBF1/MA0595.1/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TGACACCCCA-
-ATCACCCCAC
 A G C T C T A G C G T A A G T C C G T A A G T C A G T C A G T C A G T C C G T A A C G T
A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

Six3/MA0631.1/Jaspar

Match Rank:10
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TGACACCCCA--
ANANGTGATACCCTATN
 A C G T A C G T A C G T A C G T A C G T A G C T C T A G C G T A A G T C C G T A A G T C A G T C A G T C A G T C C G T A A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C