Information for 5-TCAGTTTCCAAGCTCT (Motif 9)

A C G T A G T C G T C A A C T G A C G T A C G T A C G T G T A C A G T C C T G A G T C A A C T G T G A C A C G T A T G C A C G T
Reverse Opposite:
C G T A A T C G C G T A A C T G A G T C A C G T A G C T C T A G A C T G C G T A C G T A C G T A A G T C A C G T A C T G C G T A
p-value:1e-10
log p-value:-2.434e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.3 +/- 24.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCAGTTTCCAAGCTCT
-CTGTTGCTAGGS---
 A C G T A G T C G T C A A C T G A C G T A C G T A C G T G T A C A G T C C T G A G T C A A C T G T G A C A C G T A T G C A C G T
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCAGTTTCCAAGCTCT
--ATTTTCCATT----
 A C G T A G T C G T C A A C T G A C G T A C G T A C G T G T A C A G T C C T G A G T C A A C T G T G A C A C G T A T G C A C G T
A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCAGTTTCCAAGCTCT
NTNNCGTATCCAAGTNN-
 A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C G T A C G T G T A C A G T C C T G A G T C A A C T G T G A C A C G T A T G C A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TCAGTTTCCAAGCTCT
--ATTTTCCATT----
 A C G T A G T C G T C A A C T G A C G T A C G T A C G T G T A C A G T C C T G A G T C A A C T G T G A C A C G T A T G C A C G T
A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCAGTTTCCAAGCTCT
-CGGTTTCAAA-----
 A C G T A G T C G T C A A C T G A C G T A C G T A C G T G T A C A G T C C T G A G T C A A C T G T G A C A C G T A T G C A C G T
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TCAGTTTCCAAGCTCT
AGTTTCAGTTTC--------
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C G T A C G T G T A C A G T C C T G A G T C A A C T G T G A C A C G T A T G C A C G T
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TCAGTTTCCAAGCTCT
--ATTTTCCATT----
 A C G T A G T C G T C A A C T G A C G T A C G T A C G T G T A C A G T C C T G A G T C A A C T G T G A C A C G T A T G C A C G T
A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCAGTTTCCAAGCTCT
ACTTTCACTTTC--------
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C G T A C G T G T A C A G T C C T G A G T C A A C T G T G A C A C G T A T G C A C G T
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCAGTTTCCAAGCTCT
---TTTTCCA------
 A C G T A G T C G T C A A C T G A C G T A C G T A C G T G T A C A G T C C T G A G T C A A C T G T G A C A C G T A T G C A C G T
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCAGTTTCCAAGCTCT
--ATTTTCCATT----
 A C G T A G T C G T C A A C T G A C G T A C G T A C G T G T A C A G T C C T G A G T C A A C T G T G A C A C G T A T G C A C G T
A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T