Information for 7-GYTTSACGGCKGC (Motif 9)

A C T G A G T C A C G T A C G T A T C G C G T A A G T C A C T G A C T G A G T C A C T G A C T G G T A C
Reverse Opposite:
A C T G A G T C G T A C A C T G A G T C A G T C A C T G A C G T T A C G C G T A C G T A T C A G A G T C
p-value:1e-13
log p-value:-3.042e+01
Information Content per bp:1.891
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 25.8bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYBL2/MA0777.1/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GYTTSACGGCKGC
GACNGTTTAACGGTT--
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A T C G C G T A A G T C A C T G A C T G A G T C A C T G A C T G G T A C
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GYTTSACGGCKGC--
GATATTGACAGCTGCGT
 A C G T A C G T A C T G A G T C A C G T A C G T A T C G C G T A A G T C A C T G A C T G A G T C A C T G A C T G G T A C A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

PH0170.1_Tgif2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GYTTSACGGCKGC--
GTATTGACAGCTNNTT
 A C G T A C T G A G T C A C G T A C G T A T C G C G T A A G T C A C T G A C T G A G T C A C T G A C T G G T A C A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GYTTSACGGCKGC--
TCNNTTTACAGCGNNNT
 A C G T A C G T A C T G A G T C A C G T A C G T A T C G C G T A A G T C A C T G A C T G A G T C A C T G A C T G G T A C A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GYTTSACGGCKGC--
TCNNTTTACAGCGNNNT
 A C G T A C G T A C T G A G T C A C G T A C G T A T C G C G T A A G T C A C T G A C T G A G T C A C T G A C T G G T A C A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

HOXD12/MA0873.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GYTTSACGGCKGC
NTTTTACGACT--
 A C T G A G T C A C G T A C G T A T C G C G T A A G T C A C T G A C T G A G T C A C T G A C T G G T A C
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GYTTSACGGCKGC--
TCNCTTTACAGCGNNNT
 A C G T A C G T A C T G A G T C A C G T A C G T A T C G C G T A A G T C A C T G A C T G A G T C A C T G A C T G G T A C A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GYTTSACGGCKGC
DGWTTTATGRCN--
 A C G T A C T G A G T C A C G T A C G T A T C G C G T A A G T C A C T G A C T G A G T C A C T G A C T G G T A C
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GYTTSACGGCKGC-
ANNTTTTACGACNTNN
 A C G T A C G T A C T G A G T C A C G T A C G T A T C G C G T A A G T C A C T G A C T G A G T C A C T G A C T G G T A C A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0047.1_Hoxa11/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GYTTSACGGCKGC-
NNGTTTTACGACTTTA
 A C G T A C G T A C T G A G T C A C G T A C G T A T C G C G T A A G T C A C T G A C T G A G T C A C T G A C T G G T A C A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A