Information for 13-TGGCAGCAGC (Motif 18)

A G C T A T C G A C T G A T G C T C G A A C T G G T A C C T G A A C T G A T G C
Reverse Opposite:
A T C G A G T C A G C T A C T G A G T C A G C T T A C G T G A C T A G C T C G A
p-value:1e-7
log p-value:-1.827e+01
Information Content per bp:1.823
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.25%
Number of Background Sequences with motif435.2
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets47.6 +/- 32.0bp
Average Position of motif in Background51.7 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TGGCAGCAGC----
ADGGYAGYAGCATCT
 A C G T A G C T A T C G A C T G A T G C T C G A A C T G G T A C C T G A A C T G A T G C A C G T A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGGCAGCAGC---
-AGCAGCTGCTNN
 A G C T A T C G A C T G A T G C T C G A A C T G G T A C C T G A A C T G A T G C A C G T A C G T A C G T
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGGCAGCAGC-
-CGCAGCTGCG
 A G C T A T C G A C T G A T G C T C G A A C T G G T A C C T G A A C T G A T G C A C G T
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGGCAGCAGC-
-AGCAGCTGCT
 A G C T A T C G A C T G A T G C T C G A A C T G G T A C C T G A A C T G A T G C A C G T
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGGCAGCAGC--
--NCAGCTGCTG
 A G C T A T C G A C T G A T G C T C G A A C T G G T A C C T G A A C T G A T G C A C G T A C G T
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TGGCAGCAGC-
---CAGCTGNT
 A G C T A T C G A C T G A T G C T C G A A C T G G T A C C T G A A C T G A T G C A C G T
A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGGCAGCAGC-
-GGGAGGACNG
 A G C T A T C G A C T G A T G C T C G A A C T G G T A C C T G A A C T G A T G C A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGCAGC----
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A G C T A T C G A C T G A T G C T C G A A C T G G T A C C T G A A C T G A T G C A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGGCAGCAGC--
-GACAGCTGCAG
 A G C T A T C G A C T G A T G C T C G A A C T G G T A C C T G A A C T G A T G C A C G T A C G T
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGCAGC
SCTGTCARCACC
 A C G T A C G T A G C T A T C G A C T G A T G C T C G A A C T G G T A C C T G A A C T G A T G C
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C