Information for 12-CAAAAGAGAC (Motif 15)

T G A C T G C A T C G A T G C A T C G A C T A G G C T A C T A G G C T A G T A C
Reverse Opposite:
C A T G C G A T G A T C C G A T G A T C A G C T A C G T A G C T A C G T A C T G
p-value:1e-8
log p-value:-2.069e+01
Information Content per bp:1.542
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.81%
Number of Background Sequences with motif293.8
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets51.1 +/- 25.5bp
Average Position of motif in Background47.8 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CAAAAGAGAC
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A C G T A C G T T G A C T G C A T C G A T G C A T C G A C T A G G C T A C T A G G C T A G T A C
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAAAAGAGAC--
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C G T T G A C T G C A T C G A T G C A T C G A C T A G G C T A C T A G G C T A G T A C A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CAAAAGAGAC---
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T T G A C T G C A T C G A T G C A T C G A C T A G G C T A C T A G G C T A G T A C A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAAAAGAGAC
DCYAAAAATAGM-
 A C G T A C G T A C G T T G A C T G C A T C G A T G C A T C G A C T A G G C T A C T A G G C T A G T A C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAAAAGAGAC
TACTGGAAAAAAAA-
 A C G T A C G T A C G T A C G T A C G T T G A C T G C A T C G A T G C A T C G A C T A G G C T A C T A G G C T A G T A C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAAAAGAGAC---
TGCCAAAATAAACANN
 A C G T A C G T A C G T T G A C T G C A T C G A T G C A T C G A C T A G G C T A C T A G G C T A G T A C A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAAAAGAGAC---
GGAAANTGAAACTNA
 A C G T A C G T T G A C T G C A T C G A T G C A T C G A C T A G G C T A C T A G G C T A G T A C A C G T A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAAAAGAGAC-
GAAAMTGAAACT
 A C G T T G A C T G C A T C G A T G C A T C G A C T A G G C T A C T A G G C T A G T A C A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CAAAAGAGAC--
ATATCAAAACAAAACA
 A C G T A C G T A C G T A C G T T G A C T G C A T C G A T G C A T C G A C T A G G C T A C T A G G C T A G T A C A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAAAAGAGAC
CCAAAAATAG--
 A C G T A C G T T G A C T G C A T C G A T G C A T C G A C T A G G C T A C T A G G C T A G T A C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T