Information for 3-CRGCGGARKTTCAMAT (Motif 10)

A T G C C T A G A C T G A G T C A C T G A C T G C G T A C T G A A C T G A C G T A C G T A G T C C G T A G T A C G T C A A C G T
Reverse Opposite:
C G T A A C G T A C T G C G A T A C T G C G T A C G T A G T A C A G C T A C G T A G T C A G T C A C T G A G T C A G T C A T C G
p-value:1e-13
log p-value:-3.042e+01
Information Content per bp:1.876
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.1 +/- 25.6bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETV6/MA0645.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CRGCGGARKTTCAMAT
-AGCGGAAGTG-----
 A T G C C T A G A C T G A G T C A C T G A C T G C G T A C T G A A C T G A C G T A C G T A G T C C G T A G T A C G T C A A C G T
A C G T T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CRGCGGARKTTCAMAT
NCGCGGACGTTG----
 A T G C C T A G A C T G A G T C A C T G A C T G C G T A C T G A A C T G A C G T A C G T A G T C C G T A G T A C G T C A A C G T
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T A C G T

ETV5/MA0765.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CRGCGGARKTTCAMAT
-ACCGGAAGTG-----
 A T G C C T A G A C T G A G T C A C T G A C T G C G T A C T G A A C T G A C G T A C G T A G T C C G T A G T A C G T C A A C G T
A C G T C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CRGCGGARKTTCAMAT
-----CGGTTTCAAA-
 A T G C C T A G A C T G A G T C A C T G A C T G C G T A C T G A A C T G A C G T A C G T A G T C C G T A G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

ETS(ETS)/Promoter/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CRGCGGARKTTCAMAT
AACCGGAAGT------
 A T G C C T A G A C T G A G T C A C T G A C T G C G T A C T G A A C T G A C G T A C G T A G T C C G T A G T A C G T C A A C G T
T G C A T C G A T A G C G T A C T C A G C T A G G T C A G C T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

ELK3/MA0759.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CRGCGGARKTTCAMAT
-ACCGGAAGTA-----
 A T G C C T A G A C T G A G T C A C T G A C T G C G T A C T G A A C T G A C G T A C G T A G T C C G T A G T A C G T C A A C G T
A C G T C T G A T G A C T G A C C T A G A C T G T G C A G C T A T C A G A G C T C T G A A C G T A C G T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CRGCGGARKTTCAMAT
TTAAGAGGAAGTTA----
 A C G T A C G T A T G C C T A G A C T G A G T C A C T G A C T G C G T A C T G A A C T G A C G T A C G T A G T C C G T A G T A C G T C A A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CRGCGGARKTTCAMAT
---GGGAATTTCC---
 A T G C C T A G A C T G A G T C A C T G A C T G C G T A C T G A A C T G A C G T A C G T A G T C C G T A G T A C G T C A A C G T
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CRGCGGARKTTCAMAT
-RCCGGAAGTD-----
 A T G C C T A G A C T G A G T C A C T G A C T G C G T A C T G A A C T G A C G T A C G T A G T C C G T A G T A C G T C A A C G T
A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T A C G T

ETV4/MA0764.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CRGCGGARKTTCAMAT
-ACCGGAAGTA-----
 A T G C C T A G A C T G A G T C A C T G A C T G C G T A C T G A A C T G A C G T A C G T A G T C C G T A G T A C G T C A A C G T
A C G T C T G A T A G C T G A C A T C G A C T G C T G A G C T A T C A G A G C T C T G A A C G T A C G T A C G T A C G T A C G T