Information for 5-AAGCCGAGCG (Motif 4)

C T G A C T G A A C T G A G T C A G T C C T A G G C T A A C T G A T G C C T A G
Reverse Opposite:
A G T C A T C G A G T C C G A T A G T C A C T G A C T G A G T C A G C T A G C T
p-value:1e-11
log p-value:-2.758e+01
Information Content per bp:1.859
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif62.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets49.6 +/- 27.8bp
Average Position of motif in Background49.7 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AAGCCGAGCG
GAGSCCGAGC-
 A C G T C T G A C T G A A C T G A G T C A G T C C T A G G C T A A C T G A T G C C T A G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAGCCGAGCG--
ATAAAGGCGCGCGAT
 A C G T A C G T A C G T C T G A C T G A A C T G A G T C A G T C C T A G G C T A A C T G A T G C C T A G A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

POL001.1_MTE/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AAGCCGAGCG-----
TTTCGAGCGGAACGGTCGC
 A C G T A C G T A C G T A C G T C T G A C T G A A C T G A G T C A G T C C T A G G C T A A C T G A T G C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAGCCGAGCG--
ATAAGGGCGCGCGAT
 A C G T A C G T A C G T C T G A C T G A A C T G A G T C A G T C C T A G G C T A A C T G A T G C C T A G A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAGCCGAGCG---
CAGGCCNNGGCCNN
 A C G T C T G A C T G A A C T G A G T C A G T C C T A G G C T A A C T G A T G C C T A G A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGCCGAGCG
CAGCC-----
 C T G A C T G A A C T G A G T C A G T C C T A G G C T A A C T G A T G C C T A G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AAGCCGAGCG----
GAGGGCAGCCAAGCGTGAC
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G A G T C A G T C C T A G G C T A A C T G A T G C C T A G A C G T A C G T A C G T A C G T
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAGCCGAGCG
AAATCACTGC-
 A C G T C T G A C T G A A C T G A G T C A G T C C T A G G C T A A C T G A T G C C T A G
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAGCCGAGCG
ATAATCCC----
 A C G T A C G T C T G A C T G A A C T G A G T C A G T C C T A G G C T A A C T G A T G C C T A G
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AAGCCGAGCG------
--GCCGCGCAGTGCGT
 C T G A C T G A A C T G A G T C A G T C C T A G G C T A A C T G A T G C C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T