Information for 12-GAAGTTCTTT (Motif 17)

C T A G T C G A C T G A A T C G A C G T G C A T G T A C G C A T A C G T A G C T
Reverse Opposite:
T C G A T G C A C G T A C A T G C G T A T G C A T A G C G A C T A G C T G A T C
p-value:1e-8
log p-value:-1.895e+01
Information Content per bp:1.663
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.84%
Number of Background Sequences with motif814.3
Percentage of Background Sequences with motif1.71%
Average Position of motif in Targets45.8 +/- 30.4bp
Average Position of motif in Background51.0 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GAAGTTCTTT---
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T C T A G T C G A C T G A A T C G A C G T G C A T G T A C G C A T A C G T A G C T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GAAGTTCTTT---
CNTTAAGTACTTAANG
 A C G T A C G T A C G T C T A G T C G A C T G A A T C G A C G T G C A T G T A C G C A T A C G T A G C T A C G T A C G T A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

PH0116.1_Nkx2-9/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GAAGTTCTTT---
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A C G T C T A G T C G A C T G A A T C G A C G T G C A T G T A C G C A T A C G T A G C T A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAAGTTCTTT---
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T C T A G T C G A C T G A A T C G A C G T G C A T G T A C G C A T A C G T A G C T A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAAGTTCTTT
TTAAGTGCTT-
 A C G T C T A G T C G A C T G A A T C G A C G T G C A T G T A C G C A T A C G T A G C T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

POL005.1_DPE/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAAGTTCTTT
GAAGATGTT-
 C T A G T C G A C T G A A T C G A C G T G C A T G T A C G C A T A C G T A G C T
T C A G G T C A C T G A A T C G G C T A G A C T T A C G G A C T G A C T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GAAGTTCTTT--
AGGGAAGTCATTTCT
 A C G T A C G T A C G T C T A G T C G A C T G A A T C G A C G T G C A T G T A C G C A T A C G T A G C T A C G T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAAGTTCTTT
NGAAGC-----
 A C G T C T A G T C G A C T G A A T C G A C G T G C A T G T A C G C A T A C G T A G C T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------GAAGTTCTTT
TTAAGAGGAAGTTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C T G A A T C G A C G T G C A T G T A C G C A T A C G T A G C T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GAAGTTCTTT--------
--ANTCCTTTGTCTNNNN
 C T A G T C G A C T G A A T C G A C G T G C A T G T A C G C A T A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T