Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-120 | -2.771e+02 | 0.0000 | 312.0 | 37.10% | 3887.5 | 8.12% | motif file (matrix) |
svg |
2 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-114 | -2.633e+02 | 0.0000 | 343.0 | 40.78% | 5027.0 | 10.49% | motif file (matrix) |
svg |
3 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-20 | -4.752e+01 | 0.0000 | 162.0 | 19.26% | 4194.4 | 8.76% | motif file (matrix) |
svg |
4 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-20 | -4.718e+01 | 0.0000 | 38.0 | 4.52% | 286.5 | 0.60% | motif file (matrix) |
svg |
5 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-15 | -3.516e+01 | 0.0000 | 49.0 | 5.83% | 687.9 | 1.44% | motif file (matrix) |
svg |
6 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-12 | -2.923e+01 | 0.0000 | 135.0 | 16.05% | 3982.6 | 8.31% | motif file (matrix) |
svg |
7 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-11 | -2.732e+01 | 0.0000 | 269.0 | 31.99% | 10316.9 | 21.54% | motif file (matrix) |
svg |
8 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-8 | -2.069e+01 | 0.0000 | 21.0 | 2.50% | 222.8 | 0.47% | motif file (matrix) |
svg |
9 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-8 | -2.000e+01 | 0.0000 | 79.0 | 9.39% | 2182.0 | 4.55% | motif file (matrix) |
svg |
10 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-8 | -1.937e+01 | 0.0000 | 159.0 | 18.91% | 5720.1 | 11.94% | motif file (matrix) |
svg |
11 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-8 | -1.916e+01 | 0.0000 | 93.0 | 11.06% | 2800.0 | 5.84% | motif file (matrix) |
svg |
12 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-7 | -1.804e+01 | 0.0000 | 70.0 | 8.32% | 1923.9 | 4.02% | motif file (matrix) |
svg |
13 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-7 | -1.793e+01 | 0.0000 | 83.0 | 9.87% | 2455.6 | 5.13% | motif file (matrix) |
svg |
14 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-7 | -1.785e+01 | 0.0000 | 96.0 | 11.41% | 3006.0 | 6.27% | motif file (matrix) |
svg |
15 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-7 | -1.702e+01 | 0.0000 | 120.0 | 14.27% | 4120.2 | 8.60% | motif file (matrix) |
svg |
16 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-7 | -1.623e+01 | 0.0000 | 66.0 | 7.85% | 1856.9 | 3.88% | motif file (matrix) |
svg |
17 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-7 | -1.618e+01 | 0.0000 | 109.0 | 12.96% | 3690.8 | 7.70% | motif file (matrix) |
svg |
18 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-6 | -1.583e+01 | 0.0000 | 112.0 | 13.32% | 3851.8 | 8.04% | motif file (matrix) |
svg |
19 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-6 | -1.582e+01 | 0.0000 | 49.0 | 5.83% | 1217.4 | 2.54% | motif file (matrix) |
svg |
20 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-6 | -1.461e+01 | 0.0000 | 56.0 | 6.66% | 1541.5 | 3.22% | motif file (matrix) |
svg |
21 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-6 | -1.439e+01 | 0.0000 | 26.0 | 3.09% | 472.3 | 0.99% | motif file (matrix) |
svg |
22 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-6 | -1.395e+01 | 0.0000 | 53.0 | 6.30% | 1456.2 | 3.04% | motif file (matrix) |
svg |
23 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-5 | -1.318e+01 | 0.0000 | 28.0 | 3.33% | 570.3 | 1.19% | motif file (matrix) |
svg |
24 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-5 | -1.253e+01 | 0.0001 | 47.0 | 5.59% | 1291.1 | 2.70% | motif file (matrix) |
svg |
25 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-5 | -1.169e+01 | 0.0001 | 35.0 | 4.16% | 870.9 | 1.82% | motif file (matrix) |
svg |
26 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-5 | -1.158e+01 | 0.0001 | 95.0 | 11.30% | 3428.2 | 7.16% | motif file (matrix) |
svg |
27 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-4 | -1.102e+01 | 0.0002 | 125.0 | 14.86% | 4898.2 | 10.22% | motif file (matrix) |
svg |
28 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-4 | -1.026e+01 | 0.0005 | 15.0 | 1.78% | 241.7 | 0.50% | motif file (matrix) |
svg |
29 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-3 | -9.176e+00 | 0.0013 | 62.0 | 7.37% | 2135.1 | 4.46% | motif file (matrix) |
svg |
30 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-3 | -8.936e+00 | 0.0016 | 186.0 | 22.12% | 8221.2 | 17.16% | motif file (matrix) |
svg |
31 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-3 | -8.926e+00 | 0.0016 | 73.0 | 8.68% | 2654.2 | 5.54% | motif file (matrix) |
svg |
32 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-3 | -8.742e+00 | 0.0018 | 82.0 | 9.75% | 3089.4 | 6.45% | motif file (matrix) |
svg |
33 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-3 | -8.588e+00 | 0.0021 | 78.0 | 9.27% | 2917.3 | 6.09% | motif file (matrix) |
svg |
34 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-3 | -8.333e+00 | 0.0026 | 61.0 | 7.25% | 2159.7 | 4.51% | motif file (matrix) |
svg |
35 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-3 | -8.151e+00 | 0.0030 | 70.0 | 8.32% | 2587.1 | 5.40% | motif file (matrix) |
svg |
36 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-3 | -7.702e+00 | 0.0046 | 107.0 | 12.72% | 4408.5 | 9.20% | motif file (matrix) |
svg |
37 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.177e+00 | 0.0075 | 40.0 | 4.76% | 1318.7 | 2.75% | motif file (matrix) |
svg |
38 |
| Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-3 | -7.132e+00 | 0.0077 | 4.0 | 0.48% | 23.9 | 0.05% | motif file (matrix) |
svg |
39 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-3 | -7.119e+00 | 0.0077 | 51.0 | 6.06% | 1811.0 | 3.78% | motif file (matrix) |
svg |
40 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-3 | -7.078e+00 | 0.0077 | 77.0 | 9.16% | 3026.4 | 6.32% | motif file (matrix) |
svg |
41 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-2 | -6.700e+00 | 0.0109 | 37.0 | 4.40% | 1222.4 | 2.55% | motif file (matrix) |
svg |
42 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-2 | -6.460e+00 | 0.0136 | 28.0 | 3.33% | 855.4 | 1.79% | motif file (matrix) |
svg |
43 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.437e+00 | 0.0136 | 35.0 | 4.16% | 1154.4 | 2.41% | motif file (matrix) |
svg |
44 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.407e+00 | 0.0137 | 29.0 | 3.45% | 900.6 | 1.88% | motif file (matrix) |
svg |
45 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-2 | -6.312e+00 | 0.0147 | 81.0 | 9.63% | 3309.6 | 6.91% | motif file (matrix) |
svg |
46 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.179e+00 | 0.0164 | 19.0 | 2.26% | 508.0 | 1.06% | motif file (matrix) |
svg |
47 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-2 | -6.167e+00 | 0.0164 | 12.0 | 1.43% | 253.9 | 0.53% | motif file (matrix) |
svg |
48 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.086e+00 | 0.0172 | 25.0 | 2.97% | 753.6 | 1.57% | motif file (matrix) |
svg |
49 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-2 | -6.085e+00 | 0.0172 | 24.0 | 2.85% | 712.6 | 1.49% | motif file (matrix) |
svg |
50 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.932e+00 | 0.0193 | 41.0 | 4.88% | 1459.2 | 3.05% | motif file (matrix) |
svg |
51 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.854e+00 | 0.0205 | 16.0 | 1.90% | 408.7 | 0.85% | motif file (matrix) |
svg |
52 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-2 | -5.715e+00 | 0.0231 | 90.0 | 10.70% | 3832.5 | 8.00% | motif file (matrix) |
svg |
53 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -5.641e+00 | 0.0244 | 58.0 | 6.90% | 2278.9 | 4.76% | motif file (matrix) |
svg |
54 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.542e+00 | 0.0264 | 5.0 | 0.59% | 58.2 | 0.12% | motif file (matrix) |
svg |
55 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -5.528e+00 | 0.0264 | 24.0 | 2.85% | 745.7 | 1.56% | motif file (matrix) |
svg |
56 |
| Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-2 | -5.486e+00 | 0.0269 | 3.0 | 0.36% | 18.7 | 0.04% | motif file (matrix) |
svg |
57 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.480e+00 | 0.0269 | 13.0 | 1.55% | 312.5 | 0.65% | motif file (matrix) |
svg |
58 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.463e+00 | 0.0269 | 42.0 | 4.99% | 1546.9 | 3.23% | motif file (matrix) |
svg |
59 |
| Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer | 1e-2 | -5.433e+00 | 0.0270 | 18.0 | 2.14% | 505.2 | 1.05% | motif file (matrix) |
svg |
60 |
| RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.420e+00 | 0.0270 | 25.0 | 2.97% | 794.8 | 1.66% | motif file (matrix) |
svg |
61 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.391e+00 | 0.0272 | 59.0 | 7.02% | 2354.7 | 4.92% | motif file (matrix) |
svg |
62 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.380e+00 | 0.0272 | 29.0 | 3.45% | 969.0 | 2.02% | motif file (matrix) |
svg |
63 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -5.365e+00 | 0.0272 | 149.0 | 17.72% | 6914.0 | 14.43% | motif file (matrix) |
svg |
64 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-2 | -5.325e+00 | 0.0277 | 13.0 | 1.55% | 318.5 | 0.66% | motif file (matrix) |
svg |
65 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-2 | -5.312e+00 | 0.0277 | 27.0 | 3.21% | 887.4 | 1.85% | motif file (matrix) |
svg |
66 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-2 | -5.249e+00 | 0.0290 | 42.0 | 4.99% | 1566.5 | 3.27% | motif file (matrix) |
svg |
67 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-2 | -5.209e+00 | 0.0297 | 37.0 | 4.40% | 1340.7 | 2.80% | motif file (matrix) |
svg |
68 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.105e+00 | 0.0325 | 39.0 | 4.64% | 1441.6 | 3.01% | motif file (matrix) |
svg |
69 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -5.063e+00 | 0.0334 | 42.0 | 4.99% | 1584.1 | 3.31% | motif file (matrix) |
svg |
70 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -5.048e+00 | 0.0334 | 85.0 | 10.11% | 3679.8 | 7.68% | motif file (matrix) |
svg |
71 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.976e+00 | 0.0354 | 36.0 | 4.28% | 1315.8 | 2.75% | motif file (matrix) |
svg |
72 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-2 | -4.975e+00 | 0.0354 | 6.0 | 0.71% | 94.2 | 0.20% | motif file (matrix) |
svg |
73 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-2 | -4.915e+00 | 0.0366 | 8.0 | 0.95% | 157.4 | 0.33% | motif file (matrix) |
svg |
74 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.888e+00 | 0.0371 | 5.0 | 0.59% | 69.0 | 0.14% | motif file (matrix) |
svg |
75 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -4.866e+00 | 0.0374 | 195.0 | 23.19% | 9459.3 | 19.75% | motif file (matrix) |
svg |
76 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.775e+00 | 0.0404 | 30.0 | 3.57% | 1060.2 | 2.21% | motif file (matrix) |
svg |
77 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-2 | -4.668e+00 | 0.0444 | 49.0 | 5.83% | 1957.6 | 4.09% | motif file (matrix) |
svg |