Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-112 | -2.587e+02 | 0.0000 | 349.0 | 40.02% | 5061.2 | 10.59% | motif file (matrix) |
svg |
2 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-105 | -2.432e+02 | 0.0000 | 302.0 | 34.63% | 3946.5 | 8.26% | motif file (matrix) |
svg |
3 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-21 | -4.878e+01 | 0.0000 | 39.0 | 4.47% | 279.3 | 0.58% | motif file (matrix) |
svg |
4 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-16 | -3.728e+01 | 0.0000 | 51.0 | 5.85% | 675.2 | 1.41% | motif file (matrix) |
svg |
5 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-14 | -3.443e+01 | 0.0000 | 154.0 | 17.66% | 4318.5 | 9.03% | motif file (matrix) |
svg |
6 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-12 | -2.951e+01 | 0.0000 | 80.0 | 9.17% | 1747.8 | 3.66% | motif file (matrix) |
svg |
7 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-12 | -2.905e+01 | 0.0000 | 26.0 | 2.98% | 222.4 | 0.47% | motif file (matrix) |
svg |
8 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-12 | -2.795e+01 | 0.0000 | 286.0 | 32.80% | 10660.8 | 22.30% | motif file (matrix) |
svg |
9 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-11 | -2.735e+01 | 0.0000 | 138.0 | 15.83% | 4052.7 | 8.48% | motif file (matrix) |
svg |
10 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-10 | -2.423e+01 | 0.0000 | 147.0 | 16.86% | 4619.3 | 9.66% | motif file (matrix) |
svg |
11 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-10 | -2.365e+01 | 0.0000 | 125.0 | 14.33% | 3733.4 | 7.81% | motif file (matrix) |
svg |
12 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-10 | -2.309e+01 | 0.0000 | 76.0 | 8.72% | 1848.8 | 3.87% | motif file (matrix) |
svg |
13 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-9 | -2.297e+01 | 0.0000 | 65.0 | 7.45% | 1461.6 | 3.06% | motif file (matrix) |
svg |
14 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-9 | -2.247e+01 | 0.0000 | 55.0 | 6.31% | 1139.7 | 2.38% | motif file (matrix) |
svg |
15 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-9 | -2.093e+01 | 0.0000 | 99.0 | 11.35% | 2833.9 | 5.93% | motif file (matrix) |
svg |
16 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-8 | -1.868e+01 | 0.0000 | 120.0 | 13.76% | 3842.8 | 8.04% | motif file (matrix) |
svg |
17 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-7 | -1.730e+01 | 0.0000 | 131.0 | 15.02% | 4419.3 | 9.24% | motif file (matrix) |
svg |
18 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-7 | -1.621e+01 | 0.0000 | 92.0 | 10.55% | 2828.3 | 5.92% | motif file (matrix) |
svg |
19 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-6 | -1.566e+01 | 0.0000 | 84.0 | 9.63% | 2533.8 | 5.30% | motif file (matrix) |
svg |
20 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-6 | -1.532e+01 | 0.0000 | 74.0 | 8.49% | 2148.4 | 4.49% | motif file (matrix) |
svg |
21 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-6 | -1.483e+01 | 0.0000 | 75.0 | 8.60% | 2217.8 | 4.64% | motif file (matrix) |
svg |
22 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-6 | -1.477e+01 | 0.0000 | 97.0 | 11.12% | 3136.1 | 6.56% | motif file (matrix) |
svg |
23 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-6 | -1.464e+01 | 0.0000 | 21.0 | 2.41% | 308.0 | 0.64% | motif file (matrix) |
svg |
24 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-6 | -1.457e+01 | 0.0000 | 211.0 | 24.20% | 8392.2 | 17.56% | motif file (matrix) |
svg |
25 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-6 | -1.425e+01 | 0.0000 | 41.0 | 4.70% | 949.8 | 1.99% | motif file (matrix) |
svg |
26 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.347e+01 | 0.0000 | 157.0 | 18.00% | 5943.5 | 12.43% | motif file (matrix) |
svg |
27 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-5 | -1.175e+01 | 0.0001 | 44.0 | 5.05% | 1166.5 | 2.44% | motif file (matrix) |
svg |
28 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-5 | -1.161e+01 | 0.0001 | 92.0 | 10.55% | 3162.9 | 6.62% | motif file (matrix) |
svg |
29 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-5 | -1.157e+01 | 0.0001 | 68.0 | 7.80% | 2136.3 | 4.47% | motif file (matrix) |
svg |
30 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-4 | -1.146e+01 | 0.0001 | 48.0 | 5.50% | 1334.9 | 2.79% | motif file (matrix) |
svg |
31 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-4 | -1.122e+01 | 0.0002 | 97.0 | 11.12% | 3417.4 | 7.15% | motif file (matrix) |
svg |
32 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-4 | -1.115e+01 | 0.0002 | 112.0 | 12.84% | 4099.3 | 8.58% | motif file (matrix) |
svg |
33 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-4 | -1.087e+01 | 0.0002 | 51.0 | 5.85% | 1485.4 | 3.11% | motif file (matrix) |
svg |
34 |
| ETS(ETS)/Promoter/Homer | 1e-4 | -1.026e+01 | 0.0004 | 31.0 | 3.56% | 752.8 | 1.57% | motif file (matrix) |
svg |
35 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-4 | -1.016e+01 | 0.0004 | 79.0 | 9.06% | 2712.1 | 5.67% | motif file (matrix) |
svg |
36 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-4 | -9.450e+00 | 0.0008 | 75.0 | 8.60% | 2596.5 | 5.43% | motif file (matrix) |
svg |
37 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-3 | -9.132e+00 | 0.0011 | 14.0 | 1.61% | 228.1 | 0.48% | motif file (matrix) |
svg |
38 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -9.120e+00 | 0.0011 | 48.0 | 5.50% | 1470.5 | 3.08% | motif file (matrix) |
svg |
39 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.831e+00 | 0.0014 | 44.0 | 5.05% | 1325.7 | 2.77% | motif file (matrix) |
svg |
40 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-3 | -8.543e+00 | 0.0018 | 319.0 | 36.58% | 14770.4 | 30.90% | motif file (matrix) |
svg |
41 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-3 | -8.453e+00 | 0.0019 | 33.0 | 3.78% | 910.8 | 1.91% | motif file (matrix) |
svg |
42 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-3 | -8.425e+00 | 0.0019 | 79.0 | 9.06% | 2866.9 | 6.00% | motif file (matrix) |
svg |
43 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.594e+00 | 0.0043 | 66.0 | 7.57% | 2361.8 | 4.94% | motif file (matrix) |
svg |
44 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.519e+00 | 0.0045 | 37.0 | 4.24% | 1122.6 | 2.35% | motif file (matrix) |
svg |
45 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-3 | -7.315e+00 | 0.0054 | 87.0 | 9.98% | 3347.6 | 7.00% | motif file (matrix) |
svg |
46 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.221e+00 | 0.0058 | 44.0 | 5.05% | 1433.7 | 3.00% | motif file (matrix) |
svg |
47 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-3 | -7.080e+00 | 0.0065 | 13.0 | 1.49% | 249.1 | 0.52% | motif file (matrix) |
svg |
48 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-3 | -7.063e+00 | 0.0065 | 6.0 | 0.69% | 59.7 | 0.12% | motif file (matrix) |
svg |
49 |
| Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer | 1e-3 | -6.911e+00 | 0.0074 | 14.0 | 1.61% | 287.0 | 0.60% | motif file (matrix) |
svg |
50 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-2 | -6.884e+00 | 0.0075 | 91.0 | 10.44% | 3584.9 | 7.50% | motif file (matrix) |
svg |
51 |
| PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.753e+00 | 0.0083 | 33.0 | 3.78% | 1007.1 | 2.11% | motif file (matrix) |
svg |
52 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -6.466e+00 | 0.0109 | 210.0 | 24.08% | 9532.9 | 19.94% | motif file (matrix) |
svg |
53 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-2 | -6.459e+00 | 0.0109 | 77.0 | 8.83% | 2979.5 | 6.23% | motif file (matrix) |
svg |
54 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-2 | -6.356e+00 | 0.0117 | 29.0 | 3.33% | 869.0 | 1.82% | motif file (matrix) |
svg |
55 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -6.225e+00 | 0.0131 | 22.0 | 2.52% | 600.9 | 1.26% | motif file (matrix) |
svg |
56 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | -6.142e+00 | 0.0140 | 17.0 | 1.95% | 417.8 | 0.87% | motif file (matrix) |
svg |
57 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.985e+00 | 0.0161 | 39.0 | 4.47% | 1313.3 | 2.75% | motif file (matrix) |
svg |
58 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-2 | -5.710e+00 | 0.0208 | 39.0 | 4.47% | 1335.6 | 2.79% | motif file (matrix) |
svg |
59 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-2 | -5.691e+00 | 0.0208 | 45.0 | 5.16% | 1600.5 | 3.35% | motif file (matrix) |
svg |
60 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -5.666e+00 | 0.0210 | 123.0 | 14.11% | 5300.0 | 11.09% | motif file (matrix) |
svg |
61 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -5.615e+00 | 0.0217 | 92.0 | 10.55% | 3796.5 | 7.94% | motif file (matrix) |
svg |
62 |
| E-box(bHLH)/Promoter/Homer | 1e-2 | -5.609e+00 | 0.0217 | 8.0 | 0.92% | 134.2 | 0.28% | motif file (matrix) |
svg |
63 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.589e+00 | 0.0217 | 29.0 | 3.33% | 918.9 | 1.92% | motif file (matrix) |
svg |
64 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.546e+00 | 0.0222 | 26.0 | 2.98% | 797.1 | 1.67% | motif file (matrix) |
svg |
65 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.423e+00 | 0.0247 | 42.0 | 4.82% | 1491.2 | 3.12% | motif file (matrix) |
svg |
66 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-2 | -5.386e+00 | 0.0252 | 56.0 | 6.42% | 2127.9 | 4.45% | motif file (matrix) |
svg |
67 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.151e+00 | 0.0315 | 18.0 | 2.06% | 500.4 | 1.05% | motif file (matrix) |
svg |
68 |
| PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer | 1e-2 | -5.110e+00 | 0.0323 | 8.0 | 0.92% | 146.5 | 0.31% | motif file (matrix) |
svg |
69 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -4.938e+00 | 0.0378 | 157.0 | 18.00% | 7136.0 | 14.93% | motif file (matrix) |
svg |
70 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-2 | -4.712e+00 | 0.0468 | 42.0 | 4.82% | 1559.0 | 3.26% | motif file (matrix) |
svg |
71 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-2 | -4.705e+00 | 0.0468 | 31.0 | 3.56% | 1069.1 | 2.24% | motif file (matrix) |
svg |