Homer Known Motif Enrichment Results (hs_CranialNeuralCrest_CNCCs_normal_TFAP2A_SRX1091549_homermotifs_10_13_16)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 872, Total Background Sequences = 47792
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File SVG
1 A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer1e-112-2.587e+020.0000349.040.02%5061.210.59%motif file (matrix) svg
2 G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer1e-105-2.432e+020.0000302.034.63%3946.58.26%motif file (matrix) svg
3 T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer1e-21-4.878e+010.000039.04.47%279.30.58%motif file (matrix) svg
4 T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer1e-16-3.728e+010.000051.05.85%675.21.41%motif file (matrix) svg
5 C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer1e-14-3.443e+010.0000154.017.66%4318.59.03%motif file (matrix) svg
6 A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-12-2.951e+010.000080.09.17%1747.83.66%motif file (matrix) svg
7 G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer1e-12-2.905e+010.000026.02.98%222.40.47%motif file (matrix) svg
8 G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer1e-12-2.795e+010.0000286.032.80%10660.822.30%motif file (matrix) svg
9 T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer1e-11-2.735e+010.0000138.015.83%4052.78.48%motif file (matrix) svg
10 A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-10-2.423e+010.0000147.016.86%4619.39.66%motif file (matrix) svg
11 A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-10-2.365e+010.0000125.014.33%3733.47.81%motif file (matrix) svg
12 C G T A C A T G A G T C G A C T T G C A C G T A A C G T A C G T C T G A T C A G Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer1e-10-2.309e+010.000076.08.72%1848.83.87%motif file (matrix) svg
13 C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer1e-9-2.297e+010.000065.07.45%1461.63.06%motif file (matrix) svg
14 C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer1e-9-2.247e+010.000055.06.31%1139.72.38%motif file (matrix) svg
15 C G T A C G T A A G C T G A C T T G C A G T C A A C G T A G C T C T G A T C A G Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-9-2.093e+010.000099.011.35%2833.95.93%motif file (matrix) svg
16 T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer1e-8-1.868e+010.0000120.013.76%3842.88.04%motif file (matrix) svg
17 C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer1e-7-1.730e+010.0000131.015.02%4419.39.24%motif file (matrix) svg
18 A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-7-1.621e+010.000092.010.55%2828.35.92%motif file (matrix) svg
19 T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-6-1.566e+010.000084.09.63%2533.85.30%motif file (matrix) svg
20 T C G A T C G A T A G C G T A C T C A G T A C G C G T A C G T A T C A G A G C T GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer1e-6-1.532e+010.000074.08.49%2148.44.49%motif file (matrix) svg
21 A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)1e-6-1.483e+010.000075.08.60%2217.84.64%motif file (matrix) svg
22 T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer1e-6-1.477e+010.000097.011.12%3136.16.56%motif file (matrix) svg
23 C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-6-1.464e+010.000021.02.41%308.00.64%motif file (matrix) svg
24 T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer1e-6-1.457e+010.0000211.024.20%8392.217.56%motif file (matrix) svg
25 G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer1e-6-1.425e+010.000041.04.70%949.81.99%motif file (matrix) svg
26 A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer1e-5-1.347e+010.0000157.018.00%5943.512.43%motif file (matrix) svg
27 T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer1e-5-1.175e+010.000144.05.05%1166.52.44%motif file (matrix) svg
28 C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer1e-5-1.161e+010.000192.010.55%3162.96.62%motif file (matrix) svg
29 T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer1e-5-1.157e+010.000168.07.80%2136.34.47%motif file (matrix) svg
30 C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer1e-4-1.146e+010.000148.05.50%1334.92.79%motif file (matrix) svg
31 T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-4-1.122e+010.000297.011.12%3417.47.15%motif file (matrix) svg
32 T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-4-1.115e+010.0002112.012.84%4099.38.58%motif file (matrix) svg
33 T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer1e-4-1.087e+010.000251.05.85%1485.43.11%motif file (matrix) svg
34 T G C A T C G A T A G C G T A C T C A G C T A G G T C A G C T A T C A G G A C T ETS(ETS)/Promoter/Homer1e-4-1.026e+010.000431.03.56%752.81.57%motif file (matrix) svg
35 C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer1e-4-1.016e+010.000479.09.06%2712.15.67%motif file (matrix) svg
36 C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer1e-4-9.450e+000.000875.08.60%2596.55.43%motif file (matrix) svg
37 A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer1e-3-9.132e+000.001114.01.61%228.10.48%motif file (matrix) svg
38 G A T C T C G A A G T C C G A T C G A T A G T C A T G C A C T G A T C G G A C T Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-3-9.120e+000.001148.05.50%1470.53.08%motif file (matrix) svg
39 T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer1e-3-8.831e+000.001444.05.05%1325.72.77%motif file (matrix) svg
40 C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-3-8.543e+000.0018319.036.58%14770.430.90%motif file (matrix) svg
41 T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer1e-3-8.453e+000.001933.03.78%910.81.91%motif file (matrix) svg
42 C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer1e-3-8.425e+000.001979.09.06%2866.96.00%motif file (matrix) svg
43 C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer1e-3-7.594e+000.004366.07.57%2361.84.94%motif file (matrix) svg
44 T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer1e-3-7.519e+000.004537.04.24%1122.62.35%motif file (matrix) svg
45 A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer1e-3-7.315e+000.005487.09.98%3347.67.00%motif file (matrix) svg
46 G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-3-7.221e+000.005844.05.05%1433.73.00%motif file (matrix) svg
47 T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer1e-3-7.080e+000.006513.01.49%249.10.52%motif file (matrix) svg
48 C T G A C A T G A C T G A C G T A T G C C G T A C A T G T A C G A T G C G C T A T A C G C T G A C T A G A C T G A C G T A T G C C G T A T A G C RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer1e-3-7.063e+000.00656.00.69%59.70.12%motif file (matrix) svg
49 G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer1e-3-6.911e+000.007414.01.61%287.00.60%motif file (matrix) svg
50 A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer1e-2-6.884e+000.007591.010.44%3584.97.50%motif file (matrix) svg
51 C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-2-6.753e+000.008333.03.78%1007.12.11%motif file (matrix) svg
52 C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-2-6.466e+000.0109210.024.08%9532.919.94%motif file (matrix) svg
53 C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer1e-2-6.459e+000.010977.08.83%2979.56.23%motif file (matrix) svg
54 C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer1e-2-6.356e+000.011729.03.33%869.01.82%motif file (matrix) svg
55 T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer1e-2-6.225e+000.013122.02.52%600.91.26%motif file (matrix) svg
56 T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer1e-2-6.142e+000.014017.01.95%417.80.87%motif file (matrix) svg
57 T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer1e-2-5.985e+000.016139.04.47%1313.32.75%motif file (matrix) svg
58 C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer1e-2-5.710e+000.020839.04.47%1335.62.79%motif file (matrix) svg
59 A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer1e-2-5.691e+000.020845.05.16%1600.53.35%motif file (matrix) svg
60 C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer1e-2-5.666e+000.0210123.014.11%5300.011.09%motif file (matrix) svg
61 G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-2-5.615e+000.021792.010.55%3796.57.94%motif file (matrix) svg
62 A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A E-box(bHLH)/Promoter/Homer1e-2-5.609e+000.02178.00.92%134.20.28%motif file (matrix) svg
63 T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer1e-2-5.589e+000.021729.03.33%918.91.92%motif file (matrix) svg
64 T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer1e-2-5.546e+000.022226.02.98%797.11.67%motif file (matrix) svg
65 C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer1e-2-5.423e+000.024742.04.82%1491.23.12%motif file (matrix) svg
66 A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-2-5.386e+000.025256.06.42%2127.94.45%motif file (matrix) svg
67 G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer1e-2-5.151e+000.031518.02.06%500.41.05%motif file (matrix) svg
68 C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer1e-2-5.110e+000.03238.00.92%146.50.31%motif file (matrix) svg
69 A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer1e-2-4.938e+000.0378157.018.00%7136.014.93%motif file (matrix) svg
70 T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer1e-2-4.712e+000.046842.04.82%1559.03.26%motif file (matrix) svg
71 C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer1e-2-4.705e+000.046831.03.56%1069.12.24%motif file (matrix) svg