Information for 4-TGTAAHTGAA (Motif 4)

C G A T T A C G A C G T T G C A T G C A G A C T C G A T A T C G C G T A G C T A
Reverse Opposite:
C G A T G C A T T A G C C G T A C T G A A C G T A C G T T G C A A T G C G C T A
p-value:1e-14
log p-value:-3.327e+01
Information Content per bp:1.603
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif8.72%
Number of Background Sequences with motif1494.2
Percentage of Background Sequences with motif3.13%
Average Position of motif in Targets46.7 +/- 29.2bp
Average Position of motif in Background50.2 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGTAAHTGAA
NCTGTCAATCAN
 A C G T A C G T C G A T T A C G A C G T T G C A T G C A G A C T C G A T A T C G C G T A G C T A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

ALX3/MA0634.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGTAAHTGAA
NNTAATTAGA
 C G A T T A C G A C G T T G C A T G C A G A C T C G A T A T C G C G T A G C T A
A C G T A G C T C G A T C T G A C G T A C A G T G A C T C T G A T C A G C T G A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGTAAHTGAA
SCTGTCAVTCAV
 A C G T A C G T C G A T T A C G A C G T T G C A T G C A G A C T C G A T A T C G C G T A G C T A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TGTAAHTGAA
GSCTGTCACTCA-
 A C G T A C G T A C G T C G A T T A C G A C G T T G C A T G C A G A C T C G A T A T C G C G T A G C T A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

MSX1/MA0666.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGTAAHTGAA
-NTAATTGG-
 C G A T T A C G A C G T T G C A T G C A G A C T C G A T A T C G C G T A G C T A
A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T

MIXL1/MA0662.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTAAHTGAA
NNTAATTANN
 C G A T T A C G A C G T T G C A T G C A G A C T C G A T A T C G C G T A G C T A
A C T G A G C T C G A T T C G A T C G A C G A T A G C T C T G A T C A G G C T A

Prrx2/MA0075.2/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGTAAHTGAA
-NTAATTGN-
 C G A T T A C G A C G T T G C A T G C A G A C T C G A T A T C G C G T A G C T A
A C G T A G C T C G A T C T G A C T G A A C G T A G C T C T A G T C A G A C G T

Msx3/MA0709.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGTAAHTGAA
-NTAATTGN-
 C G A T T A C G A C G T T G C A T G C A G A C T C G A T A T C G C G T A G C T A
A C G T A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T

UNCX/MA0721.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGTAAHTGAA
-NTAATTAN-
 C G A T T A C G A C G T T G C A T G C A G A C T C G A T A T C G C G T A G C T A
A C G T A G C T C G A T C T G A C T G A C A G T G A C T C T G A T C A G A C G T

DLX6/MA0882.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGTAAHTGAA
-NTAATTGN-
 C G A T T A C G A C G T T G C A T G C A G A C T C G A T A T C G C G T A G C T A
A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G A C G T