Information for 12-AACTCTGGAGAGT (Motif 19)

T G C A C G T A T G A C A G C T T A G C C G A T A T C G A T C G C T G A T C A G T G C A T A C G C G A T
Reverse Opposite:
G C T A A T G C A C G T A G T C G A C T T A G C A T G C C G T A A C T G C T G A A C T G G C A T A C G T
p-value:1e-8
log p-value:-2.018e+01
Information Content per bp:1.652
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.44%
Number of Background Sequences with motif440.9
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets47.7 +/- 24.4bp
Average Position of motif in Background49.6 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFX(?)/Promoter/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AACTCTGGAGAGT
-ATTCTCGCGAGA
 T G C A C G T A T G A C A G C T T A G C C G A T A T C G A T C G C T G A T C A G T G C A T A C G C G A T
A C G T T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A

SOX8/MA0868.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AACTCTGGAGAGT---
AACACTGCACATTGTT
 T G C A C G T A T G A C A G C T T A G C C G A T A T C G A T C G C T G A T C A G T G C A T A C G C G A T A C G T A C G T A C G T
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AACTCTGGAGAGT
AACATCTGGA----
 A C G T T G C A C G T A T G A C A G C T T A G C C G A T A T C G A T C G C T G A T C A G T G C A T A C G C G A T
T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AACTCTGGAGAGT-
----BTBRAGTGSN
 T G C A C G T A T G A C A G C T T A G C C G A T A T C G A T C G C T G A T C A G T G C A T A C G C G A T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AACTCTGGAGAGT-
----CTYRAGTGSY
 T G C A C G T A T G A C A G C T T A G C C G A T A T C G A T C G C T G A T C A G T G C A T A C G C G A T A C G T
A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AACTCTGGAGAGT--------
-NNCCTGNAAAAAAAAAAAAA
 T G C A C G T A T G A C A G C T T A G C C G A T A T C G A T C G C T G A T C A G T G C A T A C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AACTCTGGAGAGT
-GGTCTGGCAT--
 T G C A C G T A T G A C A G C T T A G C C G A T A T C G A T C G C T G A T C A G T G C A T A C G C G A T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AACTCTGGAGAGT--------
-NNCCTGNAAAAAAAAAAAAA
 T G C A C G T A T G A C A G C T T A G C C G A T A T C G A T C G C T G A T C A G T G C A T A C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

ZBTB33/MA0527.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AACTCTGGAGAGT----
--CTCTCGCGAGATCTG
 T G C A C G T A T G A C A G C T T A G C C G A T A T C G A T C G C T G A T C A G T G C A T A C G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

ZBTB18/MA0698.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AACTCTGGAGAGT
NAACATCTGGATN--
 A C G T A C G T T G C A C G T A T G A C A G C T T A G C C G A T A T C G A T C G C T G A T C A G T G C A T A C G C G A T
T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G A C G T A C G T