Information for 8-STAATTGCAG (Motif 9)

T A C G G A C T T C G A C G T A G C A T A C G T A C T G G T A C C G T A C T A G
Reverse Opposite:
G A T C A C G T A C T G A G T C G T C A C G T A C G A T A G C T C T G A A T G C
p-value:1e-12
log p-value:-2.869e+01
Information Content per bp:1.707
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.18%
Number of Background Sequences with motif952.9
Percentage of Background Sequences with motif1.98%
Average Position of motif in Targets44.1 +/- 27.0bp
Average Position of motif in Background50.5 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Msx3/MA0709.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:STAATTGCAG
NTAATTGN--
 T A C G G A C T T C G A C G T A G C A T A C G T A C T G G T A C C G T A C T A G
A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:STAATTGCAG--
GGGATTGCATNN
 T A C G G A C T T C G A C G T A G C A T A C G T A C T G G T A C C G T A C T A G A C G T A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:STAATTGCAG
TTAAGTGC--
 T A C G G A C T T C G A C G T A G C A T A C G T A C T G G T A C C G T A C T A G
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:4
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:STAATTGCAG
NTAATTGG--
 T A C G G A C T T C G A C G T A G C A T A C G T A C T G G T A C C G T A C T A G
A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:5
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:STAATTGCAG
NTAATTGG--
 T A C G G A C T T C G A C G T A G C A T A C G T A C T G G T A C C G T A C T A G
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T

Dlx2/MA0885.1/Jaspar

Match Rank:6
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:STAATTGCAG
NTAATTGN--
 T A C G G A C T T C G A C G T A G C A T A C G T A C T G G T A C C G T A C T A G
C G A T G C A T T G C A C G T A C A G T C A G T C T A G A T G C A C G T A C G T

Dlx4/MA0881.1/Jaspar

Match Rank:7
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:STAATTGCAG
NTAATTGN--
 T A C G G A C T T C G A C G T A G C A T A C G T A C T G G T A C C G T A C T A G
C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.74
Offset:0
Orientation:forward strand
Alignment:STAATTGCAG
CTAATKGV--
 T A C G G A C T T C G A C G T A G C A T A C G T A C T G G T A C C G T A C T A G
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T

Dlx3/MA0880.1/Jaspar

Match Rank:9
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:STAATTGCAG
NTAATTGN--
 T A C G G A C T T C G A C G T A G C A T A C G T A C T G G T A C C G T A C T A G
C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:10
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:STAATTGCAG
NTAATTGN--
 T A C G G A C T T C G A C G T A G C A T A C G T A C T G G T A C C G T A C T A G
A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T