Information for 9-ACTAATTGAATTA (Motif 8)

C G T A A T G C A C G T C G T A G T C A A G C T C G A T A T C G C T G A C G T A A C G T A C G T C G T A
Reverse Opposite:
C G A T C G T A C G T A A C G T A G C T T A G C C G T A C T G A A C G T C G A T C G T A A T C G G C A T
p-value:1e-12
log p-value:-2.978e+01
Information Content per bp:1.812
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.3 +/- 21.5bp
Average Position of motif in Background48.6 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROP1/MA0715.1/Jaspar

Match Rank:1
Score:0.89
Offset:2
Orientation:forward strand
Alignment:ACTAATTGAATTA
--TAATTTAATTA
 C G T A A T G C A C G T C G T A G T C A A G C T C G A T A T C G C T G A C G T A A C G T A C G T C G T A
A C G T A C G T G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A

Phox2b/MA0681.1/Jaspar

Match Rank:2
Score:0.87
Offset:2
Orientation:forward strand
Alignment:ACTAATTGAATTA
--TAATTTAATTA
 C G T A A T G C A C G T C G T A G T C A A G C T C G A T A T C G C T G A C G T A A C G T A C G T C G T A
A C G T A C G T G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

PHOX2A/MA0713.1/Jaspar

Match Rank:3
Score:0.87
Offset:2
Orientation:forward strand
Alignment:ACTAATTGAATTA
--TAATTTAATTA
 C G T A A T G C A C G T C G T A G T C A A G C T C G A T A T C G C T G A C G T A A C G T A C G T C G T A
A C G T A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.86
Offset:1
Orientation:forward strand
Alignment:ACTAATTGAATTA
-YTAATYNRATTA
 C G T A A T G C A C G T C G T A G T C A A G C T C G A T A T C G C T G A C G T A A C G T A C G T C G T A
A C G T G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:5
Score:0.85
Offset:1
Orientation:forward strand
Alignment:ACTAATTGAATTA
-NTAATBNAATTA
 C G T A A T G C A C G T C G T A G T C A A G C T C G A T A T C G C T G A C G T A A C G T A C G T C G T A
A C G T G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:ACTAATTGAATTA---
NNNTATTGAATTGNNN
 C G T A A T G C A C G T C G T A G T C A A G C T C G A T A T C G C T G A C G T A A C G T A C G T C G T A A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:ACTAATTGAATTA
-GTAATCDGATTA
 C G T A A T G C A C G T C G T A G T C A A G C T C G A T A T C G C T G A C G T A A C G T A C G T C G T A
A C G T C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A

DUX4/MA0468.1/Jaspar

Match Rank:8
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:ACTAATTGAATTA
--TGATTAAATTA
 C G T A A T G C A C G T C G T A G T C A A G C T C G A T A T C G C T G A C G T A A C G T A C G T C G T A
A C G T A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

ALX3/MA0634.1/Jaspar

Match Rank:9
Score:0.69
Offset:5
Orientation:forward strand
Alignment:ACTAATTGAATTA--
-----TCTAATTAAA
 C G T A A T G C A C G T C G T A G T C A A G C T C G A T A T C G C T G A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A

DUXA/MA0884.1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ACTAATTGAATTA-
-CTAATTTAATCAA
 C G T A A T G C A C G T C G T A G T C A A G C T C G A T A T C G C T G A C G T A A C G T A C G T C G T A A C G T
A C G T G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A