Information for 16-RTGTCAWATGAMA (Motif 20)

T C G A A C G T A C T G A C G T A G T C C G T A C G A T C G T A A C G T A C T G C G T A G T A C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C C G T A C G A T C G T A A C G T A C T G C G T A G T A C C G T A A G C T
p-value:1e-5
log p-value:-1.379e+01
Information Content per bp:1.892
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.3 +/- 26.2bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:RTGTCAWATGAMA
--GTCACATGAY-
 T C G A A C G T A C T G A C G T A G T C C G T A C G A T C G T A A C G T A C T G C G T A G T A C C G T A
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:RTGTCAWATGAMA
-TGTCANYT----
 T C G A A C G T A C T G A C G T A G T C C G T A C G A T C G T A A C G T A C T G C G T A G T A C C G T A
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:RTGTCAWATGAMA
NTGTCAN------
 T C G A A C G T A C T G A C G T A G T C C G T A C G A T C G T A A C G T A C T G C G T A G T A C C G T A
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:RTGTCAWATGAMA
-GGTCACATGAC-
 T C G A A C G T A C T G A C G T A G T C C G T A C G A T C G T A A C G T A C T G C G T A G T A C C G T A
A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-RTGTCAWATGAMA
CCTGTCAA------
 A C G T T C G A A C G T A C T G A C G T A G T C C G T A C G A T C G T A A C G T A C T G C G T A G T A C C G T A
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:RTGTCAWATGAMA-
--GTCACGTGACYV
 T C G A A C G T A C T G A C G T A G T C C G T A C G A T C G T A A C G T A C T G C G T A G T A C C G T A A C G T
A C G T A C G T T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:RTGTCAWATGAMA-
--GWAAYHTGABMC
 T C G A A C G T A C T G A C G T A G T C C G T A C G A T C G T A A C G T A C T G C G T A G T A C C G T A A C G T
A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

USF1/MA0093.2/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:RTGTCAWATGAMA
-GGTCACGTGGC-
 T C G A A C G T A C T G A C G T A G T C C G T A C G A T C G T A A C G T A C T G C G T A G T A C C G T A
A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-RTGTCAWATGAMA
GCTGTCAA------
 A C G T T C G A A C G T A C T G A C G T A G T C C G T A C G A T C G T A A C G T A C T G C G T A G T A C C G T A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

TFEC/MA0871.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:RTGTCAWATGAMA
--ATCACGTGAC-
 T C G A A C G T A C T G A C G T A G T C C G T A C G A T C G T A A C G T A C T G C G T A G T A C C G T A
A C G T A C G T T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C A C G T