Information for 12-TTTGATTTGC (Motif 18)

A G C T A G C T C G A T T C A G G C T A A G C T A C G T C G A T A T C G A T G C
Reverse Opposite:
A T C G A T G C C G T A C G T A C T G A C G A T A G T C G C T A T C G A C T G A
p-value:1e-8
log p-value:-1.982e+01
Information Content per bp:1.821
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.47%
Number of Background Sequences with motif244.5
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets52.3 +/- 30.7bp
Average Position of motif in Background49.8 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTTGATTTGC
CNGTGATTTN-
 A C G T A G C T A G C T C G A T T C A G G C T A A G C T A C G T C G A T A T C G A T G C
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTGATTTGC------
TNTAATTTGCATANNN
 A G C T A G C T C G A T T C A G G C T A A G C T A C G T C G A T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TTTGATTTGC----
-TTCATTTGCATAT
 A G C T A G C T C G A T T C A G G C T A A G C T A C G T C G A T A T C G A T G C A C G T A C G T A C G T A C G T
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Pou2f3/MA0627.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTGATTTGC------
TNTAATTTGCATACNA
 A G C T A G C T C G A T T C A G G C T A A G C T A C G T C G A T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTGATTTGC------
TNTAATTTGCATACNA
 A G C T A G C T C G A T T C A G G C T A A G C T A C G T C G A T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTGATTTGC
TTTAAT----
 A G C T A G C T C G A T T C A G G C T A A G C T A C G T C G A T A T C G A T G C
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTTGATTTGC
TNCCTTTGATGT--
 A C G T A C G T A C G T A C G T A G C T A G C T C G A T T C A G G C T A A G C T A C G T C G A T A T C G A T G C
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTTGATTTGC---
-CTCATTTGCATW
 A G C T A G C T C G A T T C A G G C T A A G C T A C G T C G A T A T C G A T G C A C G T A C G T A C G T
A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TTTGATTTGC----
----ATTTGCATAT
 A G C T A G C T C G A T T C A G G C T A A G C T A C G T C G A T A T C G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTTGATTTGC
-TTGATTGN-
 A G C T A G C T C G A T T C A G G C T A A G C T A C G T C G A T A T C G A T G C
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T