Information for 3-TGACACAGAGTACACA (Motif 12)

C G A T C T A G G T C A A G T C C G T A A T G C C G T A C T A G C G T A A C T G A C G T C G T A A T G C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A T C G A C G T G T C A G T A C C G A T A G T C A C G T A T C G A C G T A C T G A C G T A G T C C G T A
p-value:1e-10
log p-value:-2.478e+01
Information Content per bp:1.907
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.4 +/- 25.4bp
Average Position of motif in Background62.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGACACAGAGTACACA--
-NNNVCTGWGYAAACASN
C G A T C T A G G T C A A G T C C G T A A T G C C G T A C T A G C G T A A C T G A C G T C G T A A T G C C G T A A G T C C G T A A C G T A C G T
A C G T A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TGACACAGAGTACACA
----NCTAAGTAAACA
C G A T C T A G G T C A A G T C C G T A A T G C C G T A C T A G C G T A A C T G A C G T C G T A A T G C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGACACAGAGTACACA----
-----CAAAGTAAACANNNN
C G A T C T A G G T C A A G T C C G T A A T G C C G T A C T A G C G T A A C T G A C G T C G T A A T G C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGACACAGAGTACACA---
----NCWRWGTAAACANSV
C G A T C T A G G T C A A G T C C G T A A T G C C G T A C T A G C G T A A C T G A C G T C G T A A T G C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TGACACAGAGTACACA--
------TATGTAAACANG
C G A T C T A G G T C A A G T C C G T A A T G C C G T A C T A G C G T A A C T G A C G T C G T A A T G C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TGACACAGAGTACACA
------AAAGTAAACA
C G A T C T A G G T C A A G T C C G T A A T G C C G T A C T A G C G T A A C T G A C G T C G T A A T G C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TGACACAGAGTACACA
------AAAGTAAACA
C G A T C T A G G T C A A G T C C G T A A T G C C G T A C T A G C G T A A C T G A C G T C G T A A T G C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:8
Score:0.56
Offset:8
Orientation:forward strand
Alignment:TGACACAGAGTACACA
--------DGTAAACA
C G A T C T A G G T C A A G T C C G T A A T G C C G T A C T A G C G T A A C T G A C G T C G T A A T G C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A

FOXP2/MA0593.1/Jaspar

Match Rank:9
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TGACACAGAGTACACA--
-------AAGTAAACAAA
C G A T C T A G G T C A A G T C C G T A A T G C C G T A C T A G C G T A A C T G A C G T C G T A A T G C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TGACACAGAGTACACA------
------AAAGTAAACAAAAATT
C G A T C T A G G T C A A G T C C G T A A T G C C G T A C T A G C G T A A C T G A C G T C G T A A T G C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T