Information for 13-CCCTTGGCTTTGA (Motif 11)

A G T C G A T C A T G C A C G T A G C T C T A G C T A G T G A C A G C T C A G T C A G T C T A G C G T A
Reverse Opposite:
A C G T A G T C G C T A G C T A C T G A A C T G A G T C A G T C C T G A G T C A A T C G C T A G A C T G
p-value:1e-10
log p-value:-2.478e+01
Information Content per bp:1.750
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.6 +/- 25.3bp
Average Position of motif in Background28.1 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCCTTGGCTTTGA
---TTGGCA----
 A G T C G A T C A T G C A C G T A G C T C T A G C T A G T G A C A G C T C A G T C A G T C T A G C G T A
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCCTTGGCTTTGA
--NTTGGCANN--
 A G T C G A T C A T G C A C G T A G C T C T A G C T A G T G A C A G C T C A G T C A G T C T A G C G T A
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTGGCTTTGA
CCGATTGGCT----
 A C G T A G T C G A T C A T G C A C G T A G C T C T A G C T A G T G A C A G C T C A G T C A G T C T A G C G T A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCCTTGGCTTTGA----
--GCTGACCTTGAACTN
 A G T C G A T C A T G C A C G T A G C T C T A G C T A G T G A C A G C T C A G T C A G T C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CCCTTGGCTTTGA-
----TGACCTTGAN
 A G T C G A T C A T G C A C G T A G C T C T A G C T A G T G A C A G C T C A G T C A G T C T A G C G T A A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCCTTGGCTTTGA
---TTGACTTTT-
 A G T C G A T C A T G C A C G T A G C T C T A G C T A G T G A C A G C T C A G T C A G T C T A G C G T A
A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCCTTGGCTTTGA-
----TGACCTTGAV
 A G T C G A T C A T G C A C G T A G C T C T A G C T A G T G A C A G C T C A G T C A G T C T A G C G T A A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CCCTTGGCTTTGA---
------CCTTTGATGT
 A G T C G A T C A T G C A C G T A G C T C T A G C T A G T G A C A G C T C A G T C A G T C T A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CCCTTGGCTTTGA---
----TGACCTTGACCT
 A G T C G A T C A T G C A C G T A G C T C T A G C T A G T G A C A G C T C A G T C A G T C T A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTGGCTTTGA
NNACTTGCCTT---
 A C G T A G T C G A T C A T G C A C G T A G C T C T A G C T A G T G A C A G C T C A G T C A G T C T A G C G T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T