Information for 7-CAACTSTGGAGAG (Motif 9)

A T G C C T G A C G T A T A G C A C G T A T C G A G C T A C T G A C T G C G T A C T A G C G T A A C T G
Reverse Opposite:
T A G C C G A T A G T C A C G T G T A C T G A C C T G A T A G C C G T A A C T G C G A T A G C T A T C G
p-value:1e-12
log p-value:-2.828e+01
Information Content per bp:1.752
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif38.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets50.8 +/- 26.6bp
Average Position of motif in Background46.9 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)-1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CAACTSTGGAGAG--
-----BTBRAGTGSN
 A T G C C T G A C G T A T A G C A C G T A T C G A G C T A C T G A C T G C G T A C T A G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CAACTSTGGAGAG--
-----CTYRAGTGSY
 A T G C C T G A C G T A T A G C A C G T A T C G A G C T A C T G A C T G C G T A C T A G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CAACTSTGGAGAG---
-----CTTGAGTGGCT
 A T G C C T G A C G T A T A G C A C G T A T C G A G C T A C T G A C T G C G T A C T A G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CAACTSTGGAGAG---
------TTGAGTGSTT
 A T G C C T G A C G T A T A G C A C G T A T C G A G C T A C T G A C T G C G T A C T A G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CAACTSTGGAGAG
-----GTGGAT--
 A T G C C T G A C G T A T A G C A C G T A T C G A G C T A C T G A C T G C G T A C T A G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAACTSTGGAGAG
ACCATCTGTT-----
 A C G T A C G T A T G C C T G A C G T A T A G C A C G T A T C G A G C T A C T G A C T G C G T A C T A G C G T A A C T G
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------CAACTSTGGAGAG
NNTNCGCACCTGTNGAN--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C G T A T A G C A C G T A T C G A G C T A C T G A C T G C G T A C T A G C G T A A C T G
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T A C G T A C G T

MYF6/MA0667.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAACTSTGGAGAG
AACAGCTGTT-----
 A C G T A C G T A T G C C T G A C G T A T A G C A C G T A T C G A G C T A C T G A C T G C G T A C T A G C G T A A C T G
T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T A C G T A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CAACTSTGGAGAG
CGACCAACTGCCGTG--
 A C G T A C G T A C G T A C G T A T G C C T G A C G T A T A G C A C G T A T C G A G C T A C T G A C T G C G T A C T A G C G T A A C T G
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CAACTSTGGAGAG
CAGCTGTT-----
 A T G C C T G A C G T A T A G C A C G T A T C G A G C T A C T G A C T G C G T A C T A G C G T A A C T G
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T