Information for 4-AGGGCAATGGTTA (Motif 8)

C G T A A C T G A C T G A C T G A G T C C T G A C G T A C G A T A C T G A C T G A C G T A C G T C G T A
Reverse Opposite:
C G A T C G T A C G T A A G T C A G T C C G T A A C G T A G C T T C A G G T A C A G T C G T A C A C G T
p-value:1e-13
log p-value:-3.075e+01
Information Content per bp:1.922
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 12.1bp
Average Position of motif in Background42.0 +/- 2.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-AGGGCAATGGTTA
TAGGGCAAAGGTCA
 A C G T C G T A A C T G A C T G A C T G A G T C C T G A C G T A C G A T A C T G A C T G A C G T A C G T C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AGGGCAATGGTTA
GTAGGGCAAAGGTCA
 A C G T A C G T C G T A A C T G A C T G A C T G A G T C C T G A C G T A C G A T A C T G A C T G A C G T A C G T C G T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Nr2f6/MA0677.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AGGGCAATGGTTA
GAGGTCAAAGGTCA
 A C G T C G T A A C T G A C T G A C T G A G T C C T G A C G T A C G A T A C T G A C T G A C G T A C G T C G T A
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCAATGGTTA
TGGGGCAAAGGTCA
 A C G T C G T A A C T G A C T G A C T G A G T C C T G A C G T A C G A T A C T G A C T G A C G T A C G T C G T A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGGGCAATGGTTA
GAGGTCAAAGGTCA
 A C G T C G T A A C T G A C T G A C T G A G T C C T G A C G T A C G A T A C T G A C T G A C G T A C G T C G T A
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGGGCAATGGTTA--
AAAGGTCAAAGGTCAAC
 A C G T A C G T C G T A A C T G A C T G A C T G A G T C C T G A C G T A C G A T A C T G A C T G A C G T A C G T C G T A A C G T A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGGGCAATGGTTA
GGGGTCAAAGGTCA
 A C G T C G T A A C T G A C T G A C T G A G T C C T G A C G T A C G A T A C T G A C T G A C G T A C G T C G T A
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGGGCAATGGTTA
GGGGTCAAAGGTCA
 A C G T C G T A A C T G A C T G A C T G A G T C C T G A C G T A C G A T A C T G A C T G A C G T A C G T C G T A
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGGGCAATGGTTA
AGGGGTCAGAGGTCA
 A C G T A C G T C G T A A C T G A C T G A C T G A G T C C T G A C G T A C G A T A C T G A C T G A C G T A C G T C G T A
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

RXRB/MA0855.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGGGCAATGGTTA
GGGGTCAAAGGTCA
 A C G T C G T A A C T G A C T G A C T G A G T C C T G A C G T A C G A T A C T G A C T G A C G T A C G T C G T A
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A