Information for 10-GAGCAGACGCAGA (Motif 16)

A T C G C G T A A C T G A G T C C G T A A T C G T G C A A G T C C T A G A T G C C G T A A C T G C T G A
Reverse Opposite:
A G C T A G T C A C G T A T C G A G T C T C A G A C G T A T G C C G A T A C T G A G T C A C G T T A G C
p-value:1e-10
log p-value:-2.455e+01
Information Content per bp:1.813
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif31.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets48.8 +/- 28.9bp
Average Position of motif in Background47.7 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GAGCAGACGCAGA-
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A T C G C G T A A C T G A G T C C G T A A T C G T G C A A G T C C T A G A T G C C G T A A C T G C T G A A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAGCAGACGCAGA-
--GCTGASTCAGCA
 A T C G C G T A A C T G A G T C C G T A A T C G T G C A A G T C C T A G A T G C C G T A A C T G C T G A A C G T
A C G T A C G T T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGCAGACGCAGA
-TGCTGACTCA--
 A T C G C G T A A C T G A G T C C G T A A T C G T G C A A G T C C T A G A T G C C G T A A C T G C T G A
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGCAGACGCAGA
CAGCC--------
 A T C G C G T A A C T G A G T C C G T A A T C G T G C A A G T C C T A G A T G C C G T A A C T G C T G A
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGCAGACGCAGA--
AAGGKGRCGCAGGCA
 A T C G C G T A A C T G A G T C C G T A A T C G T G C A A G T C C T A G A T G C C G T A A C T G C T G A A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGCAGACGCAGA
SDGCAGGTGCNS-
 A T C G C G T A A C T G A G T C C G T A A T C G T G C A A G T C C T A G A T G C C G T A A C T G C T G A
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGCAGACGCAGA
GCGCATGCGCAG-
 A T C G C G T A A C T G A G T C C G T A A T C G T G C A A G T C C T A G A T G C C G T A A C T G C T G A
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T

HINFP/MA0131.2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAGCAGACGCAGA
NCGCGGACGTTG-
 A T C G C G T A A C T G A G T C C G T A A T C G T G C A A G T C C T A G A T G C C G T A A C T G C T G A
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAGCAGACGCAGA
HCAGCTGDTN----
 A C G T A T C G C G T A A C T G A G T C C G T A A T C G T G C A A G T C C T A G A T G C C G T A A C T G C T G A
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAGCAGACGCAGA
AGCAGCTGCTNN---
 A C G T A C G T A T C G C G T A A C T G A G T C C G T A A T C G T G C A A G T C C T A G A T G C C G T A A C T G C T G A
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T