Information for 8-TTCTCGTAATTCT (Motif 13)

A C G T A C G T A G T C A C G T A G T C A C T G A C G T C G T A C G T A C G A T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G G T C A C G T A A C G T A C G T G T C A A G T C C T A G C G T A A C T G G T C A C G T A
p-value:1e-11
log p-value:-2.661e+01
Information Content per bp:1.916
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.7 +/- 24.6bp
Average Position of motif in Background80.7 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTCTCGTAATTCT
TTCTTGGAAAN--
 A C G T A C G T A G T C A C G T A G T C A C T G A C G T C G T A C G T A C G A T A C G T A G T C A C G T
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTCTCGTAATTCT
CTTCTGGGAAA---
 A C G T A C G T A C G T A G T C A C G T A G T C A C T G A C G T C G T A C G T A C G A T A C G T A G T C A C G T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTCTCGTAATTCT
ATTTCCNGGAAATN-
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C T G A C G T C G T A C G T A C G A T A C G T A G T C A C G T
C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TTCTCGTAATTCT
GNNATTTGTCGTAANN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C T G A C G T C G T A C G T A C G A T A C G T A G T C A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTCTCGTAATTCT-
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C T G A C G T C G T A C G T A C G A T A C G T A G T C A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTCTCGTAATTCT
-GCTCGTAAAAA-
 A C G T A C G T A G T C A C G T A G T C A C T G A C G T C G T A C G T A C G A T A C G T A G T C A C G T
A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TTCTCGTAATTCT
TGCTTTCTAGGAATTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C T G A C G T C G T A C G T A C G A T A C G T A G T C A C G T
A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTCTCGTAATTCT-
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C T G A C G T C G T A C G T A C G A T A C G T A G T C A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCGTAATTCT
TTTCTNAGAAAN--
 A C G T A C G T A C G T A G T C A C G T A G T C A C T G A C G T C G T A C G T A C G A T A C G T A G T C A C G T
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTCTCGTAATTCT
TTTCCAGGAAA---
 A C G T A C G T A C G T A G T C A C G T A G T C A C T G A C G T C G T A C G T A C G A T A C G T A G T C A C G T
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T A C G T