Information for 9-CTGYMRGAGRCMATCM (Motif 22)

T A G C C A G T A C T G A G C T G T A C C T G A A C T G C G T A A C T G C T A G A G T C G T A C C G T A A C G T A G T C G T C A
Reverse Opposite:
A C G T A C T G G T C A A C G T A C T G A C T G A G T C A G T C A C G T A G T C A G C T A C T G C T G A A G T C G T C A A C T G
p-value:1e-9
log p-value:-2.238e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.5 +/- 27.7bp
Average Position of motif in Background57.9 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTGYMRGAGRCMATCM
ANTGCCTGAGGCAAN--
 A C G T T A G C C A G T A C T G A G C T G T A C C T G A A C T G C G T A A C T G C T A G A G T C G T A C C G T A A C G T A G T C G T C A
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.54
Offset:9
Orientation:forward strand
Alignment:CTGYMRGAGRCMATCM-
---------CCAATCAA
 T A G C C A G T A C T G A G C T G T A C C T G A A C T G C G T A A C T G C T A G A G T C G T A C C G T A A C G T A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.54
Offset:8
Orientation:forward strand
Alignment:CTGYMRGAGRCMATCM--
--------GGCCATTAAC
 T A G C C A G T A C T G A G C T G T A C C T G A A C T G C G T A A C T G C T A G A G T C G T A C C G T A A C G T A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTGYMRGAGRCMATCM
ATTGCCTGAGGCAAT--
 A C G T T A G C C A G T A C T G A G C T G T A C C T G A A C T G C G T A A C T G C T A G A G T C G T A C C G T A A C G T A G T C G T C A
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTGYMRGAGRCMATCM------
--NDBAGATRWTATCTVNNNNN
 T A G C C A G T A C T G A G C T G T A C C T G A A C T G C G T A A C T G C T A G A G T C G T A C C G T A A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C A G T A T G C C G T A A C T G C G T A A C G T T C G A G C T A G A C T C G T A A C G T A G T C C G A T T A C G G C A T A G C T G A T C G A C T G A C T

ATF4/MA0833.1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CTGYMRGAGRCMATCM
--GGATGATGCAATA-
 T A G C C A G T A C T G A G C T G T A C C T G A A C T G C G T A A C T G C T A G A G T C G T A C C G T A A C G T A G T C G T C A
A C G T A C G T C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CTGYMRGAGRCMATCM
DCHCAGCAGGRGGCC----
 A C G T A C G T A C G T T A G C C A G T A C T G A G C T G T A C C T G A A C T G C G T A A C T G C T A G A G T C G T A C C G T A A C G T A G T C G T C A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

PH0014.1_Cphx/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CTGYMRGAGRCMATCM--
----ATGATCGAATCAAA
 T A G C C A G T A C T G A G C T G T A C C T G A A C T G C G T A A C T G C T A G A G T C G T A C C G T A A C G T A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CTGYMRGAGRCMATCM
-TGTCAGGGGGCG---
 T A G C C A G T A C T G A G C T G T A C C T G A A C T G C G T A A C T G C T A G A G T C G T A C C G T A A C G T A G T C G T C A
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CTGYMRGAGRCMATCM
-AGCCTCAGGCA----
 T A G C C A G T A C T G A G C T G T A C C T G A A C T G C G T A A C T G C T A G A G T C G T A C C G T A A C G T A G T C G T C A
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T