Information for 10-GGAAAGGKCAAGT (Motif 16)

A C T G A T C G T C G A G T C A C T G A A C T G A C T G A C G T A G T C C G T A G T C A A C T G A C G T
Reverse Opposite:
G T C A A G T C A C G T A C G T A C T G G T C A A G T C A G T C A G C T A C G T A C G T A T G C A G T C
p-value:1e-11
log p-value:-2.540e+01
Information Content per bp:1.838
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.0 +/- 21.6bp
Average Position of motif in Background49.9 +/- 12.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GGAAAGGKCAAGT
ANGNAAAGGTCA---
 A C G T A C G T A C T G A T C G T C G A G T C A C T G A A C T G A C T G A C G T A G T C C G T A G T C A A C T G A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GGAAAGGKCAAGT-
TCTCAAAGGTCACGAG
 A C G T A C G T A C T G A T C G T C G A G T C A C T G A A C T G A C T G A C G T A G T C C G T A G T C A A C T G A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GGAAAGGKCAAGT
--CAAGGHCANV-
 A C T G A T C G T C G A G T C A C T G A A C T G A C T G A C G T A G T C C G T A G T C A A C T G A C G T
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GGAAAGGKCAAGT
---AAGGTCAC--
 A C T G A T C G T C G A G T C A C T G A A C T G A C T G A C G T A G T C C G T A G T C A A C T G A C G T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GGAAAGGKCAAGT---
----AGGTCAAGGTCA
 A C T G A T C G T C G A G T C A C T G A A C T G A C T G A C G T A G T C C G T A G T C A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGAAAGGKCAAGT-
TCTCAAAGGTCACCTG
 A C G T A C G T A C T G A T C G T C G A G T C A C T G A A C T G A C T G A C G T A G T C C G T A G T C A A C T G A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGAAAGGKCAAGT-
-CAAAGGTCAAGGG
 A C T G A T C G T C G A G T C A C T G A A C T G A C T G A C G T A G T C C G T A G T C A A C T G A C G T A C G T
A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGAAAGGKCAAGT
-TCAAGGTCAN--
 A C T G A T C G T C G A G T C A C T G A A C T G A C T G A C G T A G T C C G T A G T C A A C T G A C G T
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGAAAGGKCAAGT
--TRAGGTCA---
 A C T G A T C G T C G A G T C A C T G A A C T G A C T G A C G T A G T C C G T A G T C A A C T G A C G T
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GGAAAGGKCAAGT
----AGGTCA---
 A C T G A T C G T C G A G T C A C T G A A C T G A C T G A C G T A G T C C G T A G T C A A C T G A C G T
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T