Information for 5-TGGCCTTGGGGTG (Motif 10)

A C G T A C T G A C T G A G T C A G T C G A C T A C G T A C T G A C T G C T A G A C T G A C G T A T C G
Reverse Opposite:
A T G C C G T A A G T C A G T C A G T C A G T C C G T A C G T A A C T G A C T G A G T C A G T C C G T A
p-value:1e-13
log p-value:-3.065e+01
Information Content per bp:1.914
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.3 +/- 23.5bp
Average Position of motif in Background51.9 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGGCCTTGGGGTG
TGACCTTGAN---
 A C G T A C T G A C T G A G T C A G T C G A C T A C G T A C T G A C T G C T A G A C T G A C G T A T C G
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCTTGGGGTG
BNTGDCCTTG-----
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C G A C T A C G T A C T G A C T G C T A G A C T G A C G T A T C G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGGCCTTGGGGTG
TGACCTTGAV---
 A C G T A C T G A C T G A G T C A G T C G A C T A C G T A C T G A C T G C T A G A C T G A C G T A T C G
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCTTGGGGTG
GCTGACCTTGAACTN
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C G A C T A C G T A C T G A C T G C T A G A C T G A C G T A T C G
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCTTGGGGTG
CTGACCTTTG----
 A C G T A C G T A C T G A C T G A G T C A G T C G A C T A C G T A C T G A C T G C T A G A C T G A C G T A T C G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGGCCTTGGGGTG
-TGCCCNGGGGCA
 A C G T A C T G A C T G A G T C A G T C G A C T A C G T A C T G A C T G C T A G A C T G A C G T A T C G
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGGCCTTGGGGTG
NTGACCTTGA----
 A C G T A C G T A C T G A C T G A G T C A G T C G A C T A C G T A C T G A C T G C T A G A C T G A C G T A T C G
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCTTGGGGTG
WTGSCCTSAGGS--
 A C G T A C G T A C T G A C T G A G T C A G T C G A C T A C G T A C T G A C T G C T A G A C T G A C G T A T C G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCCTTGGGGTG
NNNNATGACCTTGANTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C G A C T A C G T A C T G A C T G C T A G A C T G A C G T A T C G
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGGCCTTGGGGTG--
-----ATGGGGTGAT
 A C G T A C T G A C T G A G T C A G T C G A C T A C G T A C T G A C T G C T A G A C T G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T