Information for 1-MACATMTGBTTYTAAT (Motif 1)

T G C A C T G A G T A C C G T A A C G T T G A C A C G T A C T G A C T G G C A T G C A T A G C T A G C T T G C A T C G A A C G T
Reverse Opposite:
C G T A A G C T A C G T T C G A T C G A C G T A C G T A T G A C A G T C C G T A A C T G T C G A A C G T A C T G G A C T A C G T
p-value:1e-55
log p-value:-1.282e+02
Information Content per bp:1.632
Number of Target Sequences with motif67.0
Percentage of Target Sequences with motif7.64%
Number of Background Sequences with motif230.6
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets49.2 +/- 24.6bp
Average Position of motif in Background49.5 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:1
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:MACATMTGBTTYTAAT---
-ACATCTGGWWTYAATTAR
 T G C A C T G A G T A C C G T A A C G T T G A C A C G T A C T G A C T G G C A T G C A T A G C T A G C T T G C A T C G A A C G T A C G T A C G T A C G T
A C G T T G C A G T A C C G T A A C G T T G A C C G A T A C T G A C T G C G A T C G A T G C A T A G C T G C T A C T G A A C G T G A C T G C T A C T G A

Bhlha15/MA0607.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:MACATMTGBTTYTAAT
-ACATATGG-------
 T G C A C T G A G T A C C G T A A C G T T G A C A C G T A C T G A C T G G C A T G C A T A G C T A G C T T G C A T C G A A C G T
A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:MACATMTGBTTYTAAT
NACATATGGN------
 T G C A C T G A G T A C C G T A A C G T T G A C A C G T A C T G A C T G G C A T G C A T A G C T A G C T T G C A T C G A A C G T
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--MACATMTGBTTYTAAT
CGACCATCTGTT------
 A C G T A C G T T G C A C T G A G T A C C G T A A C G T T G A C A C G T A C T G A C T G G C A T G C A T A G C T A G C T T G C A T C G A A C G T
G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:MACATMTGBTTYTAAT
GCCAGCTGBTNB----
 T G C A C T G A G T A C C G T A A C G T T G A C A C G T A C T G A C T G G C A T G C A T A G C T A G C T T G C A T C G A A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:MACATMTGBTTYTAAT
AACAKATGGY------
 T G C A C T G A G T A C C G T A A C G T T G A C A C G T A C T G A C T G G C A T G C A T A G C T A G C T T G C A T C G A A C G T
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:MACATMTGBTTYTAAT
-ACAGCTGTTN-----
 T G C A C T G A G T A C C G T A A C G T T G A C A C G T A C T G A C T G G C A T G C A T A G C T A G C T T G C A T C G A A C G T
A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--MACATMTGBTTYTAAT
NNVVCAGCTGBN------
 A C G T A C G T T G C A C T G A G T A C C G T A A C G T T G A C A C G T A C T G A C T G G C A T G C A T A G C T A G C T T G C A T C G A A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:MACATMTGBTTYTAAT
ANCATATGTT------
 T G C A C T G A G T A C C G T A A C G T T G A C A C G T A C T G A C T G G C A T G C A T A G C T A G C T T G C A T C G A A C G T
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:MACATMTGBTTYTAAT
--CAGCTGNT------
 T G C A C T G A G T A C C G T A A C G T T G A C A C G T A C T G A C T G G C A T G C A T A G C T A G C T T G C A T C G A A C G T
A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T