Information for 6-TTAATCAATTCCA (Motif 7)

A G C T A C G T C G T A G T C A A G C T A G T C C G T A C G T A A C G T G C A T A G T C A G T C C G T A
Reverse Opposite:
C G A T C T A G C T A G C G T A T C G A G C A T C G A T T C A G T C G A A C G T G C A T T C G A T C G A
p-value:1e-13
log p-value:-3.188e+01
Information Content per bp:1.655
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.23%
Number of Background Sequences with motif92.7
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets42.2 +/- 27.8bp
Average Position of motif in Background48.7 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0093.1_Lhx3/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----TTAATCAATTCCA
NNTATTTAATTAATTNN-
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T C A A G C T A G T C C G T A C G T A A C G T G C A T A G T C A G T C C G T A
T G C A C A G T C A G T G C T A G C A T G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A A G C T C A G T G C A T A T G C A C G T

PH0136.1_Phox2b/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----TTAATCAATTCCA
CNNNTTAATTAATTNNN
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T C A A G C T A G T C C G T A C G T A A C G T G C A T A G T C A G T C C G T A
A T G C T A G C G A C T T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A C G T C A G T T G A C A G T C A T C G

PH0095.1_Lhx5/Jaspar

Match Rank:3
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----TTAATCAATTCCA
ANNATTTAATTAATTNN-
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T C A A G C T A G T C C G T A C G T A A C G T G C A T A G T C A G T C C G T A
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G A C G T

PH0153.1_Prop1/Jaspar

Match Rank:4
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----TTAATCAATTCCA
GNNTNTTAATTAATNCN-
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T C A A G C T A G T C C G T A C G T A A C G T G C A T A G T C A G T C C G T A
C T A G G A C T G C A T G C A T G T A C G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A G C T A C G T A G T C A C T G A C G T

PH0091.1_Lhx1/Jaspar

Match Rank:5
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TTAATCAATTCCA
NNTTATTAATTAATNCN-
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T C A A G C T A G T C C G T A C G T A A C G T G C A T A G T C A G T C C G T A
T G A C C T G A C G A T C G A T C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T G C A T A G T C A C T G A C G T

PH0019.1_Dbx2/Jaspar

Match Rank:6
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----TTAATCAATTCCA
TTTAATTAATTAATTC--
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T C A A G C T A G T C C G T A C G T A A C G T G C A T A G T C A G T C C G T A
A C G T C A G T G A C T G T C A C G T A G C A T G A C T C G T A C G T A C G A T C A G T C T G A C G T A A C G T G C A T G T A C A C G T A C G T

PH0100.1_Lmx1a/Jaspar

Match Rank:7
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TTAATCAATTCCA
NNTTTTTAATTAATTCG-
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T C A A G C T A G T C C G T A C G T A A C G T G C A T A G T C A G T C C G T A
C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:8
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----TTAATCAATTCCA
AGTTTTTAATTAATTTG-
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T C A A G C T A G T C C G T A C G T A A C G T G C A T A G T C A G T C C G T A
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G A C G T

PH0028.1_En1/Jaspar

Match Rank:9
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TTAATCAATTCCA
GNATTAATTAGTTNNC
 A C G T A C G T A C G T A G C T A C G T C G T A G T C A A G C T A G T C C G T A C G T A A C G T G C A T A G T C A G T C C G T A
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

PH0146.1_Pou3f1/Jaspar

Match Rank:10
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TTAATCAATTCCA-
NANTTAATTAATTANNN
 A C G T A C G T A C G T A G C T A C G T C G T A G T C A A G C T A G T C C G T A C G T A A C G T G C A T A G T C A G T C C G T A A C G T
C A T G G C T A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T G A C T