Information for 14-CGGGCAGCAGAGG (Motif 20)

G A T C C A T G C A T G A T C G A T G C G T C A A C T G A T G C C G T A A C T G C G T A A C T G T A C G
Reverse Opposite:
A T G C A G T C A C G T G T A C G A C T A T C G G T A C A C G T A T C G A T G C G A T C G T A C C T A G
p-value:1e-8
log p-value:-2.040e+01
Information Content per bp:1.789
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif142.9
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets40.6 +/- 27.2bp
Average Position of motif in Background49.2 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGGGCAGCAGAGG---
-GGTCANYTGAGGWCA
 G A T C C A T G C A T G A T C G A T G C G T C A A C T G A T G C C G T A A C T G C G T A A C T G T A C G A C G T A C G T A C G T
A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCAGCAGAGG
TNNGGGCAG------
 A C G T A C G T G A T C C A T G C A T G A T C G A T G C G T C A A C T G A T G C C G T A A C T G C G T A A C T G T A C G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGGGCAGCAGAGG
--CGCAGCTGCG-
 G A T C C A T G C A T G A T C G A T G C G T C A A C T G A T G C C G T A A C T G C G T A A C T G T A C G
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGGGCAGCAGAGG
--ANCAGCTG---
 G A T C C A T G C A T G A T C G A T G C G T C A A C T G A T G C C G T A A C T G C G T A A C T G T A C G
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCAGCAGAGG
NGTGGGCAT------
 A C G T A C G T G A T C C A T G C A T G A T C G A T G C G T C A A C T G A T G C C G T A A C T G C G T A A C T G T A C G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGGGCAGCAGAGG
--GACAGCTGCAG
 G A T C C A T G C A T G A T C G A T G C G T C A A C T G A T G C C G T A A C T G C G T A A C T G T A C G
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCAGCAGAGG--
NNNNAGCAGCTGCTGAN
 A C G T A C G T G A T C C A T G C A T G A T C G A T G C G T C A A C T G A T G C C G T A A C T G C G T A A C T G T A C G A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGGGCAGCAGAGG------
TGGCCACCAGGGGGCGCTA
 G A T C C A T G C A T G A T C G A T G C G T C A A C T G A T G C C G T A A C T G C G T A A C T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CGGGCAGCAGAGG
----CAGGTGAGG
 G A T C C A T G C A T G A T C G A T G C G T C A A C T G A T G C C G T A A C T G C G T A A C T G T A C G
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGGGCAGCAGAGG
--AACAGCTGCAG
 G A T C C A T G C A T G A T C G A T G C G T C A A C T G A T G C C G T A A C T G C G T A A C T G T A C G
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G