Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-119 | -2.742e+02 | 0.0000 | 351.0 | 41.44% | 5088.4 | 10.53% | motif file (matrix) |
svg |
2 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-67 | -1.547e+02 | 0.0000 | 450.0 | 53.13% | 12129.3 | 25.09% | motif file (matrix) |
svg |
3 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-51 | -1.184e+02 | 0.0000 | 135.0 | 15.94% | 1561.6 | 3.23% | motif file (matrix) |
svg |
4 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-50 | -1.162e+02 | 0.0000 | 275.0 | 32.47% | 6082.2 | 12.58% | motif file (matrix) |
svg |
5 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-36 | -8.335e+01 | 0.0000 | 58.0 | 6.85% | 347.4 | 0.72% | motif file (matrix) |
svg |
6 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-35 | -8.115e+01 | 0.0000 | 169.0 | 19.95% | 3305.4 | 6.84% | motif file (matrix) |
svg |
7 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-34 | -7.840e+01 | 0.0000 | 146.0 | 17.24% | 2620.0 | 5.42% | motif file (matrix) |
svg |
8 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-32 | -7.483e+01 | 0.0000 | 48.0 | 5.67% | 252.3 | 0.52% | motif file (matrix) |
svg |
9 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-31 | -7.266e+01 | 0.0000 | 51.0 | 6.02% | 310.1 | 0.64% | motif file (matrix) |
svg |
10 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-22 | -5.188e+01 | 0.0000 | 37.0 | 4.37% | 234.0 | 0.48% | motif file (matrix) |
svg |
11 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-21 | -4.861e+01 | 0.0000 | 71.0 | 8.38% | 1033.6 | 2.14% | motif file (matrix) |
svg |
12 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-14 | -3.286e+01 | 0.0000 | 40.0 | 4.72% | 496.9 | 1.03% | motif file (matrix) |
svg |
13 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-14 | -3.237e+01 | 0.0000 | 31.0 | 3.66% | 297.1 | 0.61% | motif file (matrix) |
svg |
14 |
| VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer | 1e-13 | -3.074e+01 | 0.0000 | 39.0 | 4.60% | 505.0 | 1.04% | motif file (matrix) |
svg |
15 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-12 | -2.896e+01 | 0.0000 | 120.0 | 14.17% | 3383.9 | 7.00% | motif file (matrix) |
svg |
16 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-12 | -2.888e+01 | 0.0000 | 86.0 | 10.15% | 2062.8 | 4.27% | motif file (matrix) |
svg |
17 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-11 | -2.756e+01 | 0.0000 | 88.0 | 10.39% | 2190.8 | 4.53% | motif file (matrix) |
svg |
18 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-11 | -2.731e+01 | 0.0000 | 167.0 | 19.72% | 5497.8 | 11.37% | motif file (matrix) |
svg |
19 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-11 | -2.726e+01 | 0.0000 | 106.0 | 12.51% | 2903.2 | 6.01% | motif file (matrix) |
svg |
20 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-11 | -2.677e+01 | 0.0000 | 100.0 | 11.81% | 2688.5 | 5.56% | motif file (matrix) |
svg |
21 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-10 | -2.433e+01 | 0.0000 | 91.0 | 10.74% | 2449.3 | 5.07% | motif file (matrix) |
svg |
22 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-9 | -2.289e+01 | 0.0000 | 72.0 | 8.50% | 1783.3 | 3.69% | motif file (matrix) |
svg |
23 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-9 | -2.255e+01 | 0.0000 | 137.0 | 16.17% | 4486.5 | 9.28% | motif file (matrix) |
svg |
24 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-9 | -2.233e+01 | 0.0000 | 131.0 | 15.47% | 4236.4 | 8.76% | motif file (matrix) |
svg |
25 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-9 | -2.208e+01 | 0.0000 | 73.0 | 8.62% | 1855.6 | 3.84% | motif file (matrix) |
svg |
26 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-9 | -2.181e+01 | 0.0000 | 121.0 | 14.29% | 3834.9 | 7.93% | motif file (matrix) |
svg |
27 |
| RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer | 1e-9 | -2.163e+01 | 0.0000 | 13.0 | 1.53% | 67.7 | 0.14% | motif file (matrix) |
svg |
28 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-9 | -2.094e+01 | 0.0000 | 109.0 | 12.87% | 3373.8 | 6.98% | motif file (matrix) |
svg |
29 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-9 | -2.081e+01 | 0.0000 | 81.0 | 9.56% | 2226.0 | 4.60% | motif file (matrix) |
svg |
30 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-8 | -1.967e+01 | 0.0000 | 115.0 | 13.58% | 3714.2 | 7.68% | motif file (matrix) |
svg |
31 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-8 | -1.904e+01 | 0.0000 | 12.0 | 1.42% | 68.6 | 0.14% | motif file (matrix) |
svg |
32 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-7 | -1.831e+01 | 0.0000 | 128.0 | 15.11% | 4389.1 | 9.08% | motif file (matrix) |
svg |
33 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-7 | -1.817e+01 | 0.0000 | 111.0 | 13.11% | 3641.1 | 7.53% | motif file (matrix) |
svg |
34 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-7 | -1.783e+01 | 0.0000 | 28.0 | 3.31% | 451.5 | 0.93% | motif file (matrix) |
svg |
35 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-7 | -1.671e+01 | 0.0000 | 27.0 | 3.19% | 447.4 | 0.93% | motif file (matrix) |
svg |
36 |
| EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-6 | -1.521e+01 | 0.0000 | 30.0 | 3.54% | 577.3 | 1.19% | motif file (matrix) |
svg |
37 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-6 | -1.511e+01 | 0.0000 | 70.0 | 8.26% | 2084.9 | 4.31% | motif file (matrix) |
svg |
38 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-6 | -1.456e+01 | 0.0000 | 58.0 | 6.85% | 1626.5 | 3.36% | motif file (matrix) |
svg |
39 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-6 | -1.454e+01 | 0.0000 | 51.0 | 6.02% | 1352.1 | 2.80% | motif file (matrix) |
svg |
40 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-6 | -1.445e+01 | 0.0000 | 197.0 | 23.26% | 8059.3 | 16.67% | motif file (matrix) |
svg |
41 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-6 | -1.444e+01 | 0.0000 | 42.0 | 4.96% | 1017.7 | 2.11% | motif file (matrix) |
svg |
42 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-5 | -1.350e+01 | 0.0000 | 30.0 | 3.54% | 628.9 | 1.30% | motif file (matrix) |
svg |
43 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-5 | -1.325e+01 | 0.0000 | 85.0 | 10.04% | 2848.4 | 5.89% | motif file (matrix) |
svg |
44 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-5 | -1.322e+01 | 0.0000 | 308.0 | 36.36% | 13987.9 | 28.94% | motif file (matrix) |
svg |
45 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-5 | -1.293e+01 | 0.0000 | 65.0 | 7.67% | 2006.4 | 4.15% | motif file (matrix) |
svg |
46 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-5 | -1.210e+01 | 0.0000 | 40.0 | 4.72% | 1042.1 | 2.16% | motif file (matrix) |
svg |
47 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.201e+01 | 0.0000 | 46.0 | 5.43% | 1280.6 | 2.65% | motif file (matrix) |
svg |
48 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-5 | -1.189e+01 | 0.0001 | 47.0 | 5.55% | 1326.7 | 2.74% | motif file (matrix) |
svg |
49 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.155e+01 | 0.0001 | 45.0 | 5.31% | 1265.0 | 2.62% | motif file (matrix) |
svg |
50 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-4 | -1.113e+01 | 0.0001 | 56.0 | 6.61% | 1740.4 | 3.60% | motif file (matrix) |
svg |
51 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-4 | -1.103e+01 | 0.0001 | 70.0 | 8.26% | 2351.7 | 4.86% | motif file (matrix) |
svg |
52 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-4 | -1.103e+01 | 0.0001 | 119.0 | 14.05% | 4617.7 | 9.55% | motif file (matrix) |
svg |
53 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-4 | -1.072e+01 | 0.0002 | 85.0 | 10.04% | 3051.1 | 6.31% | motif file (matrix) |
svg |
54 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-4 | -1.069e+01 | 0.0002 | 109.0 | 12.87% | 4174.4 | 8.64% | motif file (matrix) |
svg |
55 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-4 | -1.016e+01 | 0.0003 | 74.0 | 8.74% | 2598.7 | 5.38% | motif file (matrix) |
svg |
56 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-4 | -1.008e+01 | 0.0003 | 238.0 | 28.10% | 10765.9 | 22.27% | motif file (matrix) |
svg |
57 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-4 | -1.008e+01 | 0.0003 | 16.0 | 1.89% | 275.5 | 0.57% | motif file (matrix) |
svg |
58 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-4 | -9.879e+00 | 0.0003 | 77.0 | 9.09% | 2758.9 | 5.71% | motif file (matrix) |
svg |
59 |
| ETS(ETS)/Promoter/Homer | 1e-4 | -9.745e+00 | 0.0004 | 28.0 | 3.31% | 694.0 | 1.44% | motif file (matrix) |
svg |
60 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-4 | -9.723e+00 | 0.0004 | 40.0 | 4.72% | 1161.3 | 2.40% | motif file (matrix) |
svg |
61 |
| Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-4 | -9.676e+00 | 0.0004 | 5.0 | 0.59% | 23.3 | 0.05% | motif file (matrix) |
svg |
62 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-3 | -8.927e+00 | 0.0008 | 20.0 | 2.36% | 437.4 | 0.90% | motif file (matrix) |
svg |
63 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-3 | -8.247e+00 | 0.0015 | 87.0 | 10.27% | 3382.5 | 7.00% | motif file (matrix) |
svg |
64 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-3 | -7.908e+00 | 0.0021 | 46.0 | 5.43% | 1529.8 | 3.16% | motif file (matrix) |
svg |
65 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-3 | -7.818e+00 | 0.0023 | 75.0 | 8.85% | 2858.5 | 5.91% | motif file (matrix) |
svg |
66 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-3 | -7.669e+00 | 0.0026 | 28.0 | 3.31% | 789.9 | 1.63% | motif file (matrix) |
svg |
67 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-3 | -7.663e+00 | 0.0026 | 47.0 | 5.55% | 1591.7 | 3.29% | motif file (matrix) |
svg |
68 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-3 | -7.631e+00 | 0.0026 | 88.0 | 10.39% | 3498.3 | 7.24% | motif file (matrix) |
svg |
69 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-3 | -7.468e+00 | 0.0030 | 15.0 | 1.77% | 314.7 | 0.65% | motif file (matrix) |
svg |
70 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-3 | -7.218e+00 | 0.0038 | 28.0 | 3.31% | 813.5 | 1.68% | motif file (matrix) |
svg |
71 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-3 | -7.109e+00 | 0.0042 | 41.0 | 4.84% | 1369.4 | 2.83% | motif file (matrix) |
svg |
72 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-3 | -7.062e+00 | 0.0043 | 50.0 | 5.90% | 1773.4 | 3.67% | motif file (matrix) |
svg |
73 |
| PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -6.979e+00 | 0.0046 | 33.0 | 3.90% | 1034.6 | 2.14% | motif file (matrix) |
svg |
74 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -6.959e+00 | 0.0047 | 36.0 | 4.25% | 1163.6 | 2.41% | motif file (matrix) |
svg |
75 |
| LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer | 1e-3 | -6.953e+00 | 0.0047 | 8.0 | 0.94% | 112.2 | 0.23% | motif file (matrix) |
svg |
76 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.850e+00 | 0.0051 | 38.0 | 4.49% | 1257.1 | 2.60% | motif file (matrix) |
svg |
77 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-2 | -6.789e+00 | 0.0053 | 51.0 | 6.02% | 1842.5 | 3.81% | motif file (matrix) |
svg |
78 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-2 | -6.365e+00 | 0.0080 | 58.0 | 6.85% | 2206.3 | 4.56% | motif file (matrix) |
svg |
79 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-2 | -6.346e+00 | 0.0081 | 32.0 | 3.78% | 1033.8 | 2.14% | motif file (matrix) |
svg |
80 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-2 | -6.323e+00 | 0.0082 | 28.0 | 3.31% | 865.8 | 1.79% | motif file (matrix) |
svg |
81 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-2 | -6.191e+00 | 0.0092 | 52.0 | 6.14% | 1943.6 | 4.02% | motif file (matrix) |
svg |
82 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-2 | -6.025e+00 | 0.0107 | 44.0 | 5.19% | 1590.6 | 3.29% | motif file (matrix) |
svg |
83 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -5.823e+00 | 0.0130 | 44.0 | 5.19% | 1608.9 | 3.33% | motif file (matrix) |
svg |
84 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -5.412e+00 | 0.0193 | 49.0 | 5.79% | 1880.9 | 3.89% | motif file (matrix) |
svg |
85 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-2 | -5.358e+00 | 0.0202 | 130.0 | 15.35% | 5936.1 | 12.28% | motif file (matrix) |
svg |
86 |
| YY1(Zf)/Promoter/Homer | 1e-2 | -5.059e+00 | 0.0269 | 7.0 | 0.83% | 122.7 | 0.25% | motif file (matrix) |
svg |
87 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.055e+00 | 0.0269 | 25.0 | 2.95% | 820.8 | 1.70% | motif file (matrix) |
svg |
88 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.032e+00 | 0.0270 | 42.0 | 4.96% | 1590.2 | 3.29% | motif file (matrix) |
svg |
89 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.943e+00 | 0.0292 | 19.0 | 2.24% | 573.5 | 1.19% | motif file (matrix) |
svg |
90 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-2 | -4.784e+00 | 0.0338 | 35.0 | 4.13% | 1289.4 | 2.67% | motif file (matrix) |
svg |
91 |
| Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-2 | -4.717e+00 | 0.0358 | 2.0 | 0.24% | 8.7 | 0.02% | motif file (matrix) |
svg |