Information for 8-AGGGKCARGGYCASMC (Motif 15)

C G T A A C T G A C T G A C T G A C G T A G T C G T C A C T G A A C T G A C T G G A T C A T G C G T C A A T G C G T A C A G T C
Reverse Opposite:
A C T G A C T G A T C G C A G T A T C G C T A G A G T C A G T C A G C T A C G T A C T G T G C A A G T C A G T C A G T C A C G T
p-value:1e-9
log p-value:-2.128e+01
Information Content per bp:1.861
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.8 +/- 26.9bp
Average Position of motif in Background69.8 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AGGGKCARGGYCASMC
-AGGTCAAGGTCA---
 C G T A A C T G A C T G A C T G A C G T A G T C G T C A C T G A A C T G A C T G G A T C A T G C G T C A A T G C G T A C A G T C
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AGGGKCARGGYCASMC
-AGGTCAAGGTCA---
 C G T A A C T G A C T G A C T G A C G T A G T C G T C A C T G A A C T G A C T G G A T C A T G C G T C A A T G C G T A C A G T C
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGGGKCARGGYCASMC
AAGTTCAAGGTCAGC-
 C G T A A C T G A C T G A C T G A C G T A G T C G T C A C T G A A C T G A C T G G A T C A T G C G T C A A T G C G T A C A G T C
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AGGGKCARGGYCASMC
---BTCAAGGTCA---
 C G T A A C T G A C T G A C T G A C G T A G T C G T C A C T G A A C T G A C T G G A T C A T G C G T C A A T G C G T A C A G T C
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.67
Offset:5
Orientation:forward strand
Alignment:AGGGKCARGGYCASMC
-----CAAGGHCANV-
 C G T A A C T G A C T G A C T G A C G T A G T C G T C A C T G A A C T G A C T G G A T C A T G C G T C A A T G C G T A C A G T C
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AGGGKCARGGYCASMC
---NTCAAGGTCA---
 C G T A A C T G A C T G A C T G A C G T A G T C G T C A C T G A A C T G A C T G G A T C A T G C G T C A A T G C G T A C A G T C
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGGGKCARGGYCASMC
TAGGGCAAAGGTCA---
 A C G T C G T A A C T G A C T G A C T G A C G T A G T C G T C A C T G A A C T G A C T G G A T C A T G C G T C A A T G C G T A C A G T C
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:AGGGKCARGGYCASMC
----TCAAGGTCAN--
 C G T A A C T G A C T G A C T G A C G T A G T C G T C A C T G A A C T G A C T G G A T C A T G C G T C A A T G C G T A C A G T C
A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGGGKCARGGYCASMC
----TCAAGGTCATA-
 C G T A A C T G A C T G A C T G A C G T A G T C G T C A C T G A A C T G A C T G G A T C A T G C G T C A A T G C G T A C A G T C
A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGGKCARGGYCASMC
GTAGGGCAAAGGTCA---
 A C G T A C G T C G T A A C T G A C T G A C T G A C G T A G T C G T C A C T G A A C T G A C T G G A T C A T G C G T C A A T G C G T A C A G T C
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T