Information for 7-GGGCCWGGGGGTCAGT (Motif 14)

A C T G C T A G A C T G A T G C G T A C C G T A A C T G C T A G C T A G A C T G A T C G C A G T G T A C G T C A C T A G C G A T
Reverse Opposite:
G C T A A G T C A C G T A C T G G T C A A T G C A G T C A G T C A G T C A G T C G C A T A C T G A T C G G T A C A G T C G T A C
p-value:1e-9
log p-value:-2.158e+01
Information Content per bp:1.788
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 17.8bp
Average Position of motif in Background64.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GGGCCWGGGGGTCAGT
------AGRGGTCA--
 A C T G C T A G A C T G A T G C G T A C C G T A A C T G C T A G C T A G A C T G A T C G C A G T G T A C G T C A C T A G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGGCCWGGGGGTCAGT
GTAGGTCACTGGGTCA--
 A C G T A C G T A C T G C T A G A C T G A T G C G T A C C G T A A C T G C T A G C T A G A C T G A T C G C A G T G T A C G T C A C T A G C G A T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGGCCWGGGGGTCAGT
-TGTCAGGGGGCG---
 A C T G C T A G A C T G A T G C G T A C C G T A A C T G C T A G C T A G A C T G A T C G C A G T G T A C G T C A C T A G C G A T
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGGCCWGGGGGTCAGT
-NGCCTGAGGCN----
 A C T G C T A G A C T G A T G C G T A C C G T A A C T G C T A G C T A G A C T G A T C G C A G T G T A C G T C A C T A G C G A T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGGCCWGGGGGTCAGT
WTGSCCTSAGGS-----
 A C G T A C T G C T A G A C T G A T G C G T A C C G T A A C T G C T A G C T A G A C T G A T C G C A G T G T A C G T C A C T A G C G A T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGGCCWGGGGGTCAGT-
-NTNTGGGGGGTCNNNA
 A C T G C T A G A C T G A T G C G T A C C G T A A C T G C T A G C T A G A C T G A T C G C A G T G T A C G T C A C T A G C G A T A C G T
A C G T G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGGCCWGGGGGTCAGT
ATGCCCTGAGGC-----
 A C G T A C T G C T A G A C T G A T G C G T A C C G T A A C T G C T A G C T A G A C T G A T C G C A G T G T A C G T C A C T A G C G A T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGGCCWGGGGGTCAGT
-TGCCTGAGGCN----
 A C T G C T A G A C T G A T G C G T A C C G T A A C T G C T A G C T A G A C T G A T C G C A G T G T A C G T C A C T A G C G A T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GGGCCWGGGGGTCAGT
--------AGGTCA--
 A C T G C T A G A C T G A T G C G T A C C G T A A C T G C T A G C T A G A C T G A T C G C A G T G T A C G T C A C T A G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGGCCWGGGGGTCAGT
-TGCCCNGGGGCA---
 A C T G C T A G A C T G A T G C G T A C C G T A A C T G C T A G C T A G A C T G A T C G C A G T G T A C G T C A C T A G C G A T
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T