Information for 7-TGGACTTTGA (Motif 8)

G A C T C A T G T C A G G C T A A T G C G A C T G C A T C A G T T A C G T C G A
Reverse Opposite:
A G C T A T G C G T C A C G T A C T G A T A C G C G A T A G T C G T A C C T G A
p-value:1e-12
log p-value:-2.796e+01
Information Content per bp:1.664
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.47%
Number of Background Sequences with motif982.2
Percentage of Background Sequences with motif2.08%
Average Position of motif in Targets50.8 +/- 27.7bp
Average Position of motif in Background49.9 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--TGGACTTTGA----
ATTGGACTTTGACCCC
 A C G T A C G T G A C T C A T G T C A G G C T A A T G C G A C T G C A T C A G T T A C G T C G A A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.86
Offset:-4
Orientation:reverse strand
Alignment:----TGGACTTTGA--
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T G A C T C A T G T C A G G C T A A T G C G A C T G C A T C A G T T A C G T C G A A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGA------
TGGACTTTGNNCTNTG
 G A C T C A T G T C A G G C T A A T G C G A C T G C A T C A G T T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGA-----
TGGACTTTGNNCTCN
 G A C T C A T G T C A G G C T A A T G C G A C T G C A T C A G T T A C G T C G A A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGGACTTTGA
CTGACCTTTG-
 A C G T G A C T C A T G T C A G G C T A A T G C G A C T G C A T C A G T T A C G T C G A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGA
TTGACTTTT-
 G A C T C A T G T C A G G C T A A T G C G A C T G C A T C A G T T A C G T C G A
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGGACTTTGA
NATGACCTTGA
 A C G T G A C T C A T G T C A G G C T A A T G C G A C T G C A T C A G T T A C G T C G A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TGGACTTTGA---
---CCTTTGATGT
 G A C T C A T G T C A G G C T A A T G C G A C T G C A T C A G T T A C G T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

RXRG/MA0856.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGA----
TGACCTTTGACCCC
 G A C T C A T G T C A G G C T A A T G C G A C T G C A T C A G T T A C G T C G A A C G T A C G T A C G T A C G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

Rxra/MA0512.2/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGA----
TGACCTTTGACCCC
 G A C T C A T G T C A G G C T A A T G C G A C T G C A T C A G T T A C G T C G A A C G T A C G T A C G T A C G T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C