Information for 3-CGCCCGCCCCCTCCCA (Motif 6)

A G T C A C T G A G T C A T G C A G T C A C T G A G T C A G T C A G T C A G T C A T G C A G C T A G T C A G T C G T A C C T G A
Reverse Opposite:
A G C T A C T G A C T G A C T G C T G A A T C G C T A G A C T G A C T G A C T G A G T C A C T G A T C G A C T G A G T C T C A G
p-value:1e-12
log p-value:-2.867e+01
Information Content per bp:1.862
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.9 +/- 23.9bp
Average Position of motif in Background48.1 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CGCCCGCCCCCTCCCA
GCCCCGCCCCCTCCC-
A G T C A C T G A G T C A T G C A G T C A C T G A G T C A G T C A G T C A G T C A T G C A G C T A G T C A G T C G T A C C T G A
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T

EGR1/MA0162.2/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CGCCCGCCCCCTCCCA
CCCCCGCCCCCGCC--
A G T C A C T G A G T C A T G C A G T C A C T G A G T C A G T C A G T C A G T C A T G C A G C T A G T C A G T C G T A C C T G A
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CGCCCGCCCCCTCCCA
GGTCCCGCCCCCTTCTC
A C G T A G T C A C T G A G T C A T G C A G T C A C T G A G T C A G T C A G T C A G T C A T G C A G C T A G T C A G T C G T A C C T G A
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0010.1_Egr1_1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CGCCCGCCCCCTCCCA
--TCCGCCCCCGCATT
A G T C A C T G A G T C A T G C A G T C A C T G A G T C A G T C A G T C A G T C A T G C A G C T A G T C A G T C G T A C C T G A
A C G T A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGCCCGCCCCCTCCCA
GCCCCGCCCCC-----
A G T C A C T G A G T C A T G C A G T C A C T G A G T C A G T C A G T C A G T C A T G C A G C T A G T C A G T C G T A C C T G A
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGCCCGCCCCCTCCCA
TCCCCCCCCCCCCCC--
A C G T A G T C A C T G A G T C A T G C A G T C A C T G A G T C A G T C A G T C A G T C A T G C A G C T A G T C A G T C G T A C C T G A
C A G T A G T C G T A C G T A C T A G C G T A C G A T C G A T C G T A C G A T C G T A C G T A C G T A C G A T C T G A C A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CGCCCGCCCCCTCCCA
ATCCCCGCCCCTAAAA-
A C G T A G T C A C T G A G T C A T G C A G T C A C T G A G T C A G T C A G T C A G T C A T G C A G C T A G T C A G T C G T A C C T G A
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:CGCCCGCCCCCTCCCA
------CCCCCCCC--
A G T C A C T G A G T C A T G C A G T C A C T G A G T C A G T C A G T C A G T C A T G C A G C T A G T C A G T C G T A C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGCCCGCCCCCTCCCA
GCCMCGCCCMCY----
A G T C A C T G A G T C A T G C A G T C A C T G A G T C A G T C A G T C A G T C A T G C A G C T A G T C A G T C G T A C C T G A
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGCCCGCCCCCTCCCA
GGCCCCGCCCCC-----
A C G T A G T C A C T G A G T C A T G C A G T C A C T G A G T C A G T C A G T C A G T C A T G C A G C T A G T C A G T C G T A C C T G A
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T A C G T